G2155059


Basic Information

Item Value
gene id G2155059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14226050 ~ 14227209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2464042
GGCGGGGGCTCGGCCAGCGATGGCGTCCTGTCTCTTCTTGGTGAAGTCAGAGATCCTCCAGACGAAGACGCCATCGAATGTGGTGGCCGACATCTCTCTCAGCCTGCCCTCCATCTCCGCTACCGTCAGGTCCTTCAGTCCCACCGTCCTCTCCAGCTGCCGCACCTGagacacacgcacgcgcgcacacacacacacacacacaacagtgtgCTAGCTTCtatgaattaaaaaaaaataactctGAATCTCCAGCTTTATACCCCATTATACAACGCGTGGTTAGGAATTCCTATTGTTAGAGCCCCTCCCACCCATGATATATGAGACAACATACACATGGCCACATTCATATAAAGTGGCATCGTTTAAGTCGTTACCTAGAAACCCCACTACCACTAGTCTTAGCACCTGTAATTCGTCATGGATGATTTTTGAGTTACTTTGATTTGTTTTATCTACTAATGTTGAATGAATGGTGCCAACAAGAGGAGGAGGATTTTAAAAGTAATTAAACAAGAAGAGCAAGTGGACCAGCAACCTGAGCCTAGCGTTAACATTAGACATGCAGAAATCAGTAACATTagcagaaaaagagagaaaattaAGAAGCTAGCTACATCAAGACAGAACAACTGGGCAGTGGAGTGCTTTCTGGAATGGCTATCATTCAAGGGAATAAACATCGATCTGGCAACCGTTTCAAAACACGAGATGGGTAATATTCTCCGGAGTTTCTACGCCACCTACTGAATAAGGTGTGGTTTGATTTGCAGTTGCACTTTGGCCGAAAAGGCAATGAAGGAAATCGCAAACTGAAGCCAGACTCATTCGTAATAAAAGAAGACAAAAATGAAGAAACCAGGAACCACAAAAATTCAAGAACCACAAAAATCCaatggaaagagacagagaatcGTTGTGCCTGCATGTATGAGAAACTAGGGGAATGAGCTCTGTCCCACGTAGAAATGTGCAATTCAGCATCAGAAATAAAGCTGTCGATGCTGTGACCATCTGAAAAACGATATCATTGTGGTTTCTTTTCTGATCTGCCTCATCAATGTCTTTGCTACAATGTTTCAGCTCTGTATTCCGATCCATGGACAGCGCCCCCATAAAATGTTTCAAACTGGCATTCAATTTCCCTATGGATAGAC

Function

NR:

description
TNF receptor-associated factor 2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2464042 True 1160 lncRNA 0.44 1 14226050 14227209

Neighbor

gene id symbol gene type direction distance location
LOC110509689 LOC106563103 coding downstream 39776 14184291 ~ 14186274 (-)
wu:fi75a02 LOC106563022 coding downstream 77528 14122040 ~ 14148522 (-)
pisd LOC106563023 coding downstream 111775 14064611 ~ 14114275 (-)
si:ch211-202f5.3 LOC106563025 coding downstream 169145 14054254 ~ 14056905 (-)
si:ch211-202f5.2 LOC106563026 coding downstream 180404 14041249 ~ 14045646 (-)
LOC110509692 LOC106563018 coding upstream 222238 14449447 ~ 14492040 (-)
LOC110509694 LOC106563017 coding upstream 362566 14589775 ~ 14771641 (-)
LOC110509697 LOC106563143 coding upstream 587225 14814434 ~ 14943201 (-)
LOC110509329 NA coding upstream 718403 14945612 ~ 14947114 (-)
LOC110509700 LOC106563141 coding upstream 746746 14973955 ~ 15000591 (-)
G2155130 NA non-coding downstream 8520 14215150 ~ 14217530 (-)
G2155121 NA non-coding downstream 18561 14207283 ~ 14207489 (-)
G2155064 NA non-coding downstream 25443 14197382 ~ 14200607 (-)
G2155085 NA non-coding downstream 37699 14099658 ~ 14188351 (-)
G2155074 NA non-coding downstream 151704 14071992 ~ 14074346 (-)
G2155138 NA non-coding upstream 7296 14234505 ~ 14234723 (-)
G2155230 LOC106563019 non-coding upstream 135319 14362528 ~ 14364469 (-)
G2155253 NA non-coding upstream 168545 14395754 ~ 14396780 (-)
G2155286 NA non-coding upstream 200248 14427457 ~ 14427659 (-)
G2155303 NA non-coding upstream 246971 14474180 ~ 14474831 (-)
G2155063 LOC106563020 other downstream 2119 14223121 ~ 14223931 (-)
cdc26 cdc26 other downstream 196280 14028310 ~ 14030112 (-)
G2154637 NA other downstream 215883 14000525 ~ 14010167 (-)
G2154418 LOC106563033 other downstream 443796 13780659 ~ 13782254 (-)
G2155120 NA other upstream 611 14227820 ~ 14231006 (-)
G2157715 NA other upstream 2153981 16381190 ~ 16386045 (-)
G2157743 NA other upstream 2194468 16421677 ~ 16423421 (-)
G2158088 LOC100136012 other upstream 2380416 16607625 ~ 16608006 (-)
G2158111 akna other upstream 2416472 16643681 ~ 16646597 (-)

Expression


Co-expression Network