G2155253



Basic Information


Item Value
gene id G2155253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14395754 ~ 14396780 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2464243
AGAGGGTTACATATAGACATCTGTTTTTCATTCAGTTGAAAACAAAATCAAAGCATAATTTAAACTGGTATTCAATTATATCCCTGGTTGAAACCCAAAACCATGATCTTCTCAAGAACAGTTGTCACACTTTGTTGAATATGTGGACATTATTCAAATCGGTTGGAAATAATAGAAAATGACATTCTAAATATCAATCACTCAACATGAAACAAATTATGCCTAATTTAGTCGGTCTTTCCCTCAAGTCTGTTGAATGATTTACTGTATGAATAGAGGGGAACTTTGTTAACCCATATAGCTTTATTTTCTCCCTCCTTGGGAAGACTGAGGAATGTGGCATCAAGCCACATTATTATTGTCACGTTTCTCTGAAATTTTGCTAGTTCAATTGTGCTGTCCACAGTAATGTACAATGGGTTCTGAATGCTCAGACGGTTTTTCAATCAATTGCCAGAGAAAGAACGTAAAAGTGTGGGAGATTAGAATGGAAGAGCGAGTGTCAAAATTGGAATAGGACTCTTTTTACTCTTTCCGCAAAAAGAGTAACTGAATTCCCCTTTTATTGTTTCACATTTCATAATCAATCTGCCTTATTGCTAATTGGTATATTTAAATATCTTTGGACCTATAAGGAGCCATGTTTTGCTTGTAAATTTTCCAATGAACAcaaacaataaaataaatcaaacacACAAAAGTCAATTTATGACGTTTCTGGTATAACGTATCCATCCCAATATTGACAGCTAGTTGGATAAAAACACATCCAGTAACATGATTGTCCTTGCTTGATGTGGGACTTGGTGAACTGAAGATTGAGGGTCAAAAGAGGGTCAAGGGGTGATGCTcctgggaggGGGGGAGGAGGGCAGTATAAAGTCTATGATCTTTTCCTTCGACTTTCGAAGTTTCTGAAGTTGACTGGTCTAATCTTCATTTCGGCGAACTGTATTGAATGCTCGTGTCCCTTCCAATGGAACCAGTTGA

Function


NR:

description
tenascin-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2464243 True 990 lncRNA 0.37 2 14395754 14396780

Neighbor


gene id symbol gene type direction distance location
LOC110509689 LOC106563103 coding downstream 209480 14184291 ~ 14186274 (-)
wu:fi75a02 LOC106563022 coding downstream 247232 14122040 ~ 14148522 (-)
pisd LOC106563023 coding downstream 281479 14064611 ~ 14114275 (-)
si:ch211-202f5.3 LOC106563025 coding downstream 338849 14054254 ~ 14056905 (-)
si:ch211-202f5.2 LOC106563026 coding downstream 350108 14041249 ~ 14045646 (-)
LOC110509692 LOC106563018 coding upstream 52667 14449447 ~ 14492040 (-)
LOC110509694 LOC106563017 coding upstream 192995 14589775 ~ 14771641 (-)
LOC110509697 LOC106563143 coding upstream 417654 14814434 ~ 14943201 (-)
LOC110509329 NA coding upstream 548832 14945612 ~ 14947114 (-)
LOC110509700 LOC106563141 coding upstream 577175 14973955 ~ 15000591 (-)
G2155230 LOC106563019 non-coding downstream 31285 14362528 ~ 14364469 (-)
G2155138 NA non-coding downstream 161031 14234505 ~ 14234723 (-)
G2155059 NA non-coding downstream 168545 14226050 ~ 14227209 (-)
G2155130 NA non-coding downstream 178224 14215150 ~ 14217530 (-)
G2155121 NA non-coding downstream 188265 14207283 ~ 14207489 (-)
G2155286 NA non-coding upstream 30677 14427457 ~ 14427659 (-)
G2155303 NA non-coding upstream 77400 14474180 ~ 14474831 (-)
G2155331 NA non-coding upstream 118727 14515507 ~ 14527818 (-)
G2155376 NA non-coding upstream 173998 14570778 ~ 14570999 (-)
G2155387 NA non-coding upstream 183897 14580677 ~ 14580893 (-)
G2155120 NA other downstream 164748 14227820 ~ 14231006 (-)
G2155063 LOC106563020 other downstream 171823 14223121 ~ 14223931 (-)
cdc26 cdc26 other downstream 365984 14028310 ~ 14030112 (-)
G2154637 NA other downstream 385587 14000525 ~ 14010167 (-)
G2157715 NA other upstream 1984410 16381190 ~ 16386045 (-)
G2157743 NA other upstream 2024897 16421677 ~ 16423421 (-)
G2158088 LOC100136012 other upstream 2210845 16607625 ~ 16608006 (-)
G2158111 akna other upstream 2246901 16643681 ~ 16646597 (-)
LOC110509757 LOC106563370 other upstream 4879488 19275539 ~ 19277044 (-)

Expression



Co-expression Network