G2154952


Basic Information

Item Value
gene id G2154952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14426943 ~ 14427162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463920
caaaccccaaccagaaaccatagATTACAGGACGCATCCGCACTgagttaaaggctagagctgccgctttcaaggagcgggactctaacccggaagcttataaaaaatcccgctatgccctccgacaaaccctcaaacaggcaaagcgtcaatacaggactaagatcgagtcgtactacaccggctctgacgctcgtcggatgtgatagggcctgcaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463920 True 220 lncRNA 0.52 1 14426943 14427162

Neighbor

gene id symbol gene type direction distance location
LOC110509691 LOC106563019 coding upstream 30135 14289212 ~ 14396808 (+)
LOC110509690 LOC106563020 coding upstream 195706 14215122 ~ 14231240 (+)
LOC110509688 LOC106563021 coding upstream 250947 14171799 ~ 14175996 (+)
prpf4 prpf4 coding upstream 385661 14035322 ~ 14041282 (+)
LOC110509696 LOC106563151 coding downstream 358825 14785987 ~ 14806264 (+)
LOC110509698 NA coding downstream 448555 14875717 ~ 14879923 (+)
LOC110509699 LOC106563142 coding downstream 529178 14956340 ~ 14970212 (+)
trnaa-ugc-224 NA coding downstream 602866 15030028 ~ 15030099 (+)
LOC110509704 NA coding downstream 722126 15149288 ~ 15151748 (+)
G2154893 NA non-coding upstream 110328 14316289 ~ 14316615 (+)
G2154834 NA non-coding upstream 190237 14236418 ~ 14236706 (+)
G2154832 NA non-coding upstream 191592 14235072 ~ 14235351 (+)
G2154830 NA non-coding upstream 193030 14233566 ~ 14233913 (+)
G2155370 NA non-coding downstream 142474 14569636 ~ 14569859 (+)
G2155388 NA non-coding downstream 154885 14582047 ~ 14582529 (+)
G2155389 NA non-coding downstream 155884 14583046 ~ 14583441 (+)
G2155398 NA non-coding downstream 160876 14588038 ~ 14588249 (+)
G2155401 NA non-coding downstream 172002 14599164 ~ 14599383 (+)
G2154512 NA other upstream 491124 13915670 ~ 13935819 (+)
G2154438 NA other upstream 612973 13806013 ~ 13813970 (+)
G2154391 NA other upstream 650809 13772708 ~ 13776134 (+)
G2154294 NA other upstream 757773 13668289 ~ 13669170 (+)
G2153316 NA other upstream 1666453 12759880 ~ 12760490 (+)
G2155696 NA other downstream 591465 15018627 ~ 15093949 (+)
G2157602 NA other downstream 1923555 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 2762182 17189344 ~ 17191128 (+)
LOC110509751 LOC106563328 other downstream 4633381 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 4639016 19066137 ~ 19068784 (+)

Expression


Co-expression Network