G2155517


Basic Information

Item Value
gene id G2155517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14814444 ~ 14817916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2464521
AGCATTAGTTTATTTCTTATTTTCCACAGGTTAACTCAGAAACAGTATTGTTATATACAAAATCTGGAATGTTGAATGAATGCATATCAATCATCTTACTGTAGCCGTTTCCAGAGAAACCTTTGAAATAGCTATACATTAAACGGGTTGTGTctgcattgcaatttattgctggTTTTACAAACTCTGAGTGACTAATGCCATGATTAATTGATTTCTTAACTTTTTAAAAAAGTATTTACATTTTGATTAGTAATGTCTAAAAAGTCACAGGAGActgagctaaataaataaaaacaaggtGGGAGAATGAAGAGAAGACCAGTTTATCTTGGATATGGCAGATAGGTGACCCCCTAGGTTTTAGTCCCAGATTGTACAAGGTCTAAATATGACATTGACCCAAGAAATCTCATTAGATTGTTCCTATTCCCAGAAAGAAAGTAACACAGTGCCCACAACAAAATAGCACAAAAGCATAATTACAATGTTCTAATTTAAAACATGATGTACAGTAATCTTGCAAGGGGGAAATGCAGGAGAGAAACCTTAACAAGTCAATATGTTACCTCTCTAGGCTAACATTGACCAATGACAAATATCTGCAGTTATGAGCGTGCCACTGGGTCTGCAGTTGCTAAATAAAAATGGTACAGTGTCATTTGGGGGCAATGTTCAGTTGAAATTCAAAATGGAAAAAAGGGGAGCAAACATTGACAATGTTTTCTATTCAAGTCACAAGTTGACAGTAACATGAGTATAATCTTTAGCTGTACGCATAAAGTAACATTGAATTACATGCATACCTTTTGGAATTTGCGAAGGATTTGGATAACGACATTGCCATTAAATGTGTgggaaaaaaactaaacaatGATCAATCTCTGATAAGCACTTTATATACGCTCTGTCACAATTCAGTGTTTGCATTACAATCGATTGACAAAAAAGGTTCAGTGGGGTAATAAGATGGGTGAATTCATGCAAACAACACATACATCTATAGACTGTTGATTACACCAAGTGGACATAGCGTAAAAGGTTTTAAATGCATTTTTATAACTTGACACTATTCAATTAGAAACATTACAAATGACTTTGCAGCTCGGATTGAGGTTCTTTTACACTGGGGTAAAATGTATTAATGTTTGCACAGATACACGTAACCAGTTGGTTTGAACAGTTTTCCGAGCAGTCAAGTTTGGGAAGGCCTGCAACTCATATGTAAGCCTAGGGCTGAGTGACGCAAGAGCATTCACTATTGTACAATGCAGACTTTTACATTCTACTTTCTTTGCTAAAAATGTAACTCCCCATGTTGTTTTTTCATTAGAAAAGATTCTTTACAATATAAAATCCTGTTTAACAATCAGCGATCACTAAAAGGGTTTCTTCTTGCGTTTTTTTCCTTTTATAGGTCTAAAAAAAATGCAATTGGATGTCTTTCTGAATGAAAATAAAGCCGCTGACTATTGCTATTAAACCATTGTGTCGAGTCACACGGGGTGTACTCAAGAAGAGAGCGTTTAGTTTGTTGTGAAGAGAAATATGTGAATATTGCTTGGGTCTCAGGGTAGTCACTCCCTCCACCCCCTTGTTCAAACAGTTCAAGGTCTATGGCACTTAACAGCTCAGTCCCCCCCAGCGTAGAGCAAAGAGTCCATGCATGAAACACTATCCCAACACAAAAAGAGAGTGAAAAGCCTAGATTGATGTCtaaaaaatatgatttttatACACAAAAAGGCAAACTATGGTTGTTTTCCCACACTTAAACACAAATATGTTAGACAGACATGAACCCCTTTTTAATCTCAAACCGTTTTGTGAGTGTTTTCTAGTTACAAGTGGCTGAGTTGAGGGAGAAGCCCTTTCAAATCTTACCAACATGAGTGGAAGGGGCCCAGAGACCAGGCCTAAACCTGCTCGGAGTCTTGAGTGGAAGGGGCAGAGACCAGGCCTAAACCTGCTCGGAGTCTTGAGTGGAAGGGGCCCAGAGACCAGGCCTAAACCTGCTCGGAGTCTTGAGTGGAAGGGGCGGCGTCTGACAGGCTGCATTTCAAAATCACACCCTATATCCTttgtatatagtgcaccactaGTATGTAGCGCACTTTGGGGAATAGGGCGTTACTCTCATCAGCACCTCCCCAACACCTGACCATGGTCTCAACACATGTTTTGGTGACCTGACATTACCACTCTGCCTCCTGACCCACTATCTCACATCCTGGCTAGGCTAATTAAGGCCAAGCAAAGACATTCCTCTATTGTTACTCCCAGTCAGTTTCCCCACAAAATAAATATCATGATCTGTTCCATATCCCAGTCCCAATTCCATTTCACATACGAAGAGTGTTTTACAGCATCCAAGTAGTCAGCAACCGGAGTAGCTGATTCAGTGACGGAGTGAGTGTCCTTGTCTGTCAGGAGTTCAGTGACGGCACAGGCAGGTCTTTTCAGGCGAGGGACATTCCAAGCCAGTGGTTCCACGGAGGCTGCTAAAACTGTTCCTAGACTGCGGACAGTATATAATAAATGTATGCAGTGTGTGGCTCACAGGCTTTATGGAGGCAGAAGCAAATTCATTGTCCTTCTCAACTATCCACCATGTGCAGGACCTGGTCGAAAACTGTCACAATTGCAAGTAGGCGGGGGATTCTTAAACATCGTTCTGAAAGCGCAACCCAGCACTACATTCATCTCCACAAGAAAGCACATAACATTGTCCCCCAGATCAAATGTCGCCTAAGTCTCAGCAtctattaaataaaataaaaaatacatgatttaaaaaggagggcagagagagacagacggacccTGCCCTCTAGTGGTCAACTACAGTTAATGCTCAACTACAGCAACTACAACTCCGGAATGATGTAGGAATATTATTTTCTTCAAAAAAACAAAAGTCTAACGATACAGAAagcactttttgttgttgttgatctctGTGTCGTTGGAGCACACGCCGTCTCTGCAGCGCCCTCTGTGTAAAAAATAACCGGCTATCCCACAGTGACTTCTTCTTTAAGACGACTAAGTCGACAACGCATGCTTCCAGATGTTTGCTCCCCCTCCCCaggtccctctcctccctcactaaGTCCACTTGATGCAGTGGTTCGGCCCCTGTTATCCCAAAAGCTCTAGAAGGTTCTCTTCCCCATAAAGCAGTTCAGCTCTTTTATTTATAGACCAGGCTCCTCTGTATATAAAAACAAGAGGGATTGGAGGTCGTCGCTCCACagtcccgtctgtctctctctacgcCGCCAACTCTCGGACGATGATCATATCCACAGTGGTGGGAAATGTCTTCAGCAGGGCCACGGCATTCCCATGGTCAACGTTCACAAAGCTATATCCGTTT

Function

NR:

description
hypothetical protein cypCar_00013778, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2464521 True 3379 lncRNA 0.41 2 14814444 14817916
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110509696 LOC106563151 coding upstream 8180 14785987 ~ 14806264 (+)
LOC110509691 LOC106563019 coding upstream 417636 14289212 ~ 14396808 (+)
LOC110509690 LOC106563020 coding upstream 583207 14215122 ~ 14231240 (+)
LOC110509688 LOC106563021 coding upstream 638448 14171799 ~ 14175996 (+)
LOC118945711 NA coding upstream 773877 14040434 ~ 14040567 (+)
LOC110509698 NA coding downstream 57801 14875717 ~ 14879923 (+)
LOC110509699 LOC106563142 coding downstream 138424 14956340 ~ 14970212 (+)
trnaa-ugc-224 NA coding downstream 212112 15030028 ~ 15030099 (+)
LOC110509704 NA coding downstream 331372 15149288 ~ 15151748 (+)
LOC110509331 LOC106567539 coding downstream 1020399 15838315 ~ 15844398 (+)
G2155455 NA non-coding upstream 149410 14664802 ~ 14665034 (+)
G2155454 NA non-coding upstream 151349 14662668 ~ 14663095 (+)
G2155402 NA non-coding upstream 214623 14599590 ~ 14599821 (+)
G2155401 NA non-coding upstream 215061 14599164 ~ 14599383 (+)
G2155398 NA non-coding upstream 226195 14588038 ~ 14588249 (+)
G2155717 NA non-coding downstream 288066 15105982 ~ 15108773 (+)
G2156433 NA non-coding downstream 614718 15432634 ~ 15432922 (+)
G2156469 NA non-coding downstream 639157 15457073 ~ 15457322 (+)
G2156480 NA non-coding downstream 651671 15469587 ~ 15469788 (+)
G2156481 NA non-coding downstream 652232 15470148 ~ 15470489 (+)
G2154512 NA other upstream 878625 13915670 ~ 13935819 (+)
G2154438 NA other upstream 1000474 13806013 ~ 13813970 (+)
G2154391 NA other upstream 1038310 13772708 ~ 13776134 (+)
G2154294 NA other upstream 1145274 13668289 ~ 13669170 (+)
G2153316 NA other upstream 2053954 12759880 ~ 12760490 (+)
G2155696 NA other downstream 200711 15018627 ~ 15093949 (+)
G2157602 NA other downstream 1532801 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 2371428 17189344 ~ 17191128 (+)
LOC110509751 LOC106563328 other downstream 4242627 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 4248262 19066137 ~ 19068784 (+)

Expression

G2155517 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 6.
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G2155517 Expression in each Bioproject

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G2155517 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location