Gene
RNA
| Item | Value |
|---|---|
| gene id | G2157547 |
| gene name | LOC106563134 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 16281260 ~ 16281484 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| voltage-dependent N-type calcium channel subunit alpha-1B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2466724 | True | 225 | lncRNA | 0.65 | 1 | 16281260 | 16281484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509706 | LOC106563136 | coding | downstream | 263761 | 15970492 ~ 16017499 (-) |
| LOC110509703 | LOC106563138 | coding | downstream | 855952 | 15105979 ~ 15425308 (-) |
| LOC110509702 | LOC106563139 | coding | downstream | 1204250 | 15038817 ~ 15087213 (-) |
| LOC110509700 | LOC106563141 | coding | downstream | 1280669 | 14973955 ~ 15000591 (-) |
| LOC110509329 | NA | coding | downstream | 1334146 | 14945612 ~ 14947114 (-) |
| stxbp1a | LOC106563129 | coding | upstream | 376902 | 16658386 ~ 16701533 (-) |
| slc31a2 | copt2 | coding | upstream | 483861 | 16765345 ~ 16776377 (-) |
| LOC110509719 | fut7 | coding | upstream | 577436 | 16858920 ~ 16866531 (-) |
| LOC110509724 | LOC106563119 | coding | upstream | 784878 | 17066362 ~ 17093537 (-) |
| LOC110509723 | LOC106563118 | coding | upstream | 812572 | 17094056 ~ 17135891 (-) |
| G2157544 | LOC106563134 | non-coding | downstream | 5371 | 16275551 ~ 16275889 (-) |
| G2157391 | NA | non-coding | downstream | 249869 | 16030978 ~ 16031391 (-) |
| G2157383 | NA | non-coding | downstream | 259649 | 16021401 ~ 16021611 (-) |
| G2157057 | NA | non-coding | downstream | 396946 | 15884092 ~ 15884314 (-) |
| G2157056 | NA | non-coding | downstream | 397598 | 15883453 ~ 15883662 (-) |
| G2157552 | NA | non-coding | upstream | 6455 | 16287939 ~ 16288170 (-) |
| G2157764 | NA | non-coding | upstream | 166227 | 16447711 ~ 16451774 (-) |
| G2158016 | LOC106563130 | non-coding | upstream | 179920 | 16461404 ~ 16463045 (-) |
| G2158021 | NA | non-coding | upstream | 190266 | 16471750 ~ 16472039 (-) |
| G2158022 | NA | non-coding | upstream | 190969 | 16472453 ~ 16472660 (-) |
| G2155120 | NA | other | downstream | 2050254 | 14227820 ~ 14231006 (-) |
| G2155063 | LOC106563020 | other | downstream | 2057329 | 14223121 ~ 14223931 (-) |
| si:ch211-202f5.3 | LOC106563025 | other | downstream | 2224381 | 14054254 ~ 14056905 (-) |
| cdc26 | cdc26 | other | downstream | 2251490 | 14028310 ~ 14030112 (-) |
| G2154637 | NA | other | downstream | 2271093 | 14000525 ~ 14010167 (-) |
| G2157715 | NA | other | upstream | 99706 | 16381190 ~ 16386045 (-) |
| G2157743 | NA | other | upstream | 140193 | 16421677 ~ 16423421 (-) |
| G2158088 | LOC100136012 | other | upstream | 326141 | 16607625 ~ 16608006 (-) |
| G2158111 | akna | other | upstream | 362197 | 16643681 ~ 16646597 (-) |
| LOC110509757 | LOC106563370 | other | upstream | 2994784 | 19275539 ~ 19277044 (-) |
