G2157764


Basic Information

Item Value
gene id G2157764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 16447711 ~ 16451774 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2466947
TATTGTCGATCCAAATGACAGAAAAACAGGTTATTGTTGTATGGACAGGGTTTGAGAGAAGCTGCGGCTGGACTTACAACAGCAGTGTGGAAAATATTACAGTCTGTGGCGTGACAATCTTAGAGAGATGAAAGGATTCTTCAAAGTCAAGCTTAATAGGTAGCAGTTTAACGGCAAGGCAATCCCTGTGACCACTATCTTCATGAAGAAATTGCCGGGCTTAGTAGTCTTTGGGGGAAGATGACCCTTCTCTAATGGACGCTACTTCTTAAACAGTTCAATGAATTGATTGTGAGAACACAAAACACTATTAATCATGTCTTTGGTCTAGGACGCAAGGGTCATATTTGCAATCTCCACCAACAGATTGCTACATGGAAGAGCAACGTTTTCAATCTATAAAGCAGTATTGAGTGGACAACATTTTATATTTTGTAGGGCCTTTTAAAACAAGTAATTTCAGTGAGTTTCTAAATTTCTtaatgggcggcaggtagcctaccaGTTAGAGCGTTGAGTCAGTAACCGaaaaggttgctagttcaaatccccaagaTGACTATGGAAAACAAATCTGTCGCTGCCCTTGAGCAGGCACTAAACCCTAATAACAgatatgcaaaaaaaacacatttccattttaCCACACACTGTAAAGGTCACGTTGGAGAAACAACAAAAAAGCACCCCTATTTTGACTTTTTATCCTCCCTCTCATTTCTCtccatgtagatattccatttccAACCCGATCAAAATTTCCGAGGGGATTTTAATTCAATCTCCGGACATTTTTTCATTATGGCCACGTAACAGTTTCAAATACGAAAAATCATGATGTGCTAAATATAAAATGACCTCTCTGAAACTCTGAATTGTGTATCGAAGTGTTCGCCATGGTGACAAATGACTACATTCCTTTTCTCATGTCTTTAGTCTCCTCCAATCTTTAAAAACTCACACCAACTAAGCACCAATGGCGATCATGAATATTTGATTGAGTTTAAAGTCTGACTGGGGCCAAAGCTAAGAAGCAATTACAGGAACAGCACACAATCTCTGGGAGTGAGGAAGCTGCCAATCGCTAGTTGCTATAGCTTGGAAGGCACAACGTTAAAATGACTTCCAACACACCACAAAAGGTGGTAGGGAAGGTAAGCTGTGCTGTGGATGACAGACCGTGTGGAGGAGGGTTCTGCCAAGCACTGGTGCAGGTCCAATTCTGCTTACTCAAATCCTGATGGTATAGGTCAGGATTTGGGTTCAAAAATCTACCTATGAAATATAGAGTTATGATAATTTTGCAAAGCACaacctgtattttttttttatcagttgATCAACTAGAAGAATTATAGTTAAAAATGCTTAAAGAAGCACAATGTAAGGGCTATGAAATGAAACAATTGATGTCAGCCAAAGTGTGACTTCAGGACAAACTGTCTCAAATGgtacccaattccctatataattaactacttttgaccagggctctggtatatagggaatagggtgctatttgggatgaacgcctcctctccacctctctggaGGTCTATTTTTCATACTGGGAGAAGCACAATTAAATATAAGCAACACCATTGCTTAAAAGGGTTCAATGCAgcagtttttatctcaatatcaaatcatttctgggtaacaattaagtaccttactgtgattgtttcaaTTAAAATAGTAAATGAAAataaaactatatatatatatttttagcaaATAGCAAAATAGAATTtcactaggactgtctgggaggggTCTGATATTGGCAAAGACTTGAAACTCTATCTTATTAGTCTAACTAATTTACCCCATGGTTAAGTCACCATGGAAAGGCCAATGGTCCAACCcatcaaaacaggctgaaatttcaggctaACTTCaagcagctcttacactaaaagggcattctcattttcacaatattattcaaACCTCATaaatgtggaaatatatataaaaacactgaaatcacatttttgactgcactgggcctttaacacgCCAGAAGGGGAACACAATCACAACATTCAGGAGACCATTTAAAAAGAATGCCCATAAAATATTTACACTTGTTACGCAATAATTTTACTTGAAACCTCCCAAATAGTGAGCTATAAAAAGACACCTCCCTTGCCAAAATGCTCTACAAGACATAACCATTAACCATATACActttgtacaaaacattagggacacctgctctttccaaaacagactgaccaggtgaatccaggtgaaagctatgatcccttattgatgtcacttgttaaatccaatgtgagtgtagatgaaggagaggagaggggttaaaaaaaatgattacaagagacaattgagacgtgtGTGGCATTCagcgggtgaatgggcaagacaaaatatttaagtgcctctgaacagagtatggtagtaggtgccaggcgcaccagtttcaGTCTGTAAATGAAACGCTGCTGTTTTTTTCACCCTCAGTTTCCaatgtgcatcaagaatggtccaccacccaactgtgggaagcattggagtcaacattggccagcatccctgtggaacgctttagacaccttgtagagtccatgccccaacaaactGAGGCTGTTCGGAAGGCAAAAGGGGGCACGACTTTATTAGgaaggcgttcctaatgttttgtacactcagtgtctaCCCTGGACATCTTCAGCAGGCACGGCATAAAATTGGGAGAAACAACCATTCATGATTGAGAGCTCTGTAGGTATGCTTAACTAGCCATCAGCCTAATATCACCAACACCTCAAGAAAACAAGAACCCTTCTCATAGACTCTTACTAGTCTATATTCATTCATTCTGGTATTAATTCTGACTGATAATGAGTCTGGCTTTGTAACAGATTTAATTCAAGCAACAAGAATATATTCTACCCAGAACCCAAACATGAGAATTCTCAGTGGCAGCACACTAATTAGGCTGTGGCAAGTCGATTAATCTAGAACCCAAAATGTCGCAGTTCAGTCATGAGAGACTTGCCTACAAGTCGATTGCATAAACCTTAACTCCCTCACGATGAGACGAATACACAGACACATGGTCCCAAATGAAATATGCATGAAATTCTCATAACACAGCAATATTGAGTTATTTACACAACTTCTGTCTGCATTGGAGAAATCACATTTAAAAGTATGTGATTACTTCATTACCTCGATTACGTTCCCAATTACCCTTCATACAATCCCATGAAACAGGAGGGTTAGACTTGTTATAAGTCatcatgaaaaacacaaaaacaaatcaataaatacataaaaaataaaacaaaaaaaactgtcaTTGTAGGCTGTGGTCCCATGTGCAACAATGATTAATGGCATTTCATTCATAGGCCATCAGTGTTGGTTTTTATCTATTCAGCTAAAGCACGCAGAATCACCTGCATGCATCACTACTCAAATCTACTCCCACATCACTTAAATATACAAAAAGACAAATCCTTACATTTTAGAGATGAAAGTGCAAAGCATTTTTTCACCACAGGAGCTTCAACAGTCACGGTACTATAGGCTACTTCAATTGGTCCTCCACATCGACAGTAGTAACTAGTGGTGTAAGgctcatagaaatagaatgaacacacaaaatggccgccagtccacccattatggaTTAACTGACGTAAATGGCGACGCCCATTCTACTCATTCTATTTCTGTGGTAATGGCTCTCAAGGAGAGGAACTCCTGAAAGACCTATGGGTTAGGAGTGTTTCACCTCCCATTAAAGGCTCTCAACAATGCAACCCATGTATTCAGTACTCCCTTCAGGGTAAACAATGCTCTAACATAAATGTATGGGACAAATCAATGGGAAAGCATAATCATCTGGTACTTCCACCTTATTACATATCCATCGTCAGCCGGTCGGGGAGGGGAGAGGATTATACTACTTTTAGTGTTAGAAAATAATCAAACTGGCACCTGGGGGAGTCTCAGTCTAGTTTCCATTGAGCTGATTCTGTAGACCATCGCTCTTCTTGTTTCTTTTAAACTGAACAGCAAGCCATCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2466947 True 4064 lncRNA 0.39 1 16447711 16451774

Neighbor

gene id symbol gene type direction distance location
LOC110509706 LOC106563136 coding downstream 430212 15970492 ~ 16017499 (-)
LOC110509703 LOC106563138 coding downstream 1022403 15105979 ~ 15425308 (-)
LOC110509702 LOC106563139 coding downstream 1370701 15038817 ~ 15087213 (-)
LOC110509700 LOC106563141 coding downstream 1447120 14973955 ~ 15000591 (-)
LOC110509329 NA coding downstream 1500597 14945612 ~ 14947114 (-)
stxbp1a LOC106563129 coding upstream 206612 16658386 ~ 16701533 (-)
slc31a2 copt2 coding upstream 313571 16765345 ~ 16776377 (-)
LOC110509719 fut7 coding upstream 407146 16858920 ~ 16866531 (-)
LOC110509724 LOC106563119 coding upstream 614588 17066362 ~ 17093537 (-)
LOC110509723 LOC106563118 coding upstream 642282 17094056 ~ 17135891 (-)
G2157552 NA non-coding downstream 159541 16287939 ~ 16288170 (-)
G2157547 LOC106563134 non-coding downstream 166227 16281260 ~ 16281484 (-)
G2157544 LOC106563134 non-coding downstream 171822 16275551 ~ 16275889 (-)
G2157391 NA non-coding downstream 416320 16030978 ~ 16031391 (-)
G2157383 NA non-coding downstream 426100 16021401 ~ 16021611 (-)
G2158016 LOC106563130 non-coding upstream 9630 16461404 ~ 16463045 (-)
G2158021 NA non-coding upstream 19976 16471750 ~ 16472039 (-)
G2158022 NA non-coding upstream 20679 16472453 ~ 16472660 (-)
G2158027 NA non-coding upstream 28586 16480360 ~ 16480587 (-)
G2158029 NA non-coding upstream 32073 16483847 ~ 16484130 (-)
G2157743 NA other downstream 24290 16421677 ~ 16423421 (-)
G2157715 NA other downstream 61666 16381190 ~ 16386045 (-)
G2155120 NA other downstream 2216705 14227820 ~ 14231006 (-)
G2155063 LOC106563020 other downstream 2223780 14223121 ~ 14223931 (-)
si:ch211-202f5.3 LOC106563025 other downstream 2390832 14054254 ~ 14056905 (-)
G2158088 LOC100136012 other upstream 155851 16607625 ~ 16608006 (-)
G2158111 akna other upstream 191907 16643681 ~ 16646597 (-)
LOC110509757 LOC106563370 other upstream 2824494 19275539 ~ 19277044 (-)
G2162005 NA other upstream 3532771 19984545 ~ 19984779 (-)
G2162127 NA other upstream 3631371 20083145 ~ 20083618 (-)

Expression


Co-expression Network