Gene
RNA
| Item | Value |
|---|---|
| gene id | G2158027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 16480360 ~ 16480587 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2467236 | True | 228 | lncRNA | 0.44 | 1 | 16480360 | 16480587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509706 | LOC106563136 | coding | downstream | 462861 | 15970492 ~ 16017499 (-) |
| LOC110509703 | LOC106563138 | coding | downstream | 1055052 | 15105979 ~ 15425308 (-) |
| LOC110509702 | LOC106563139 | coding | downstream | 1403350 | 15038817 ~ 15087213 (-) |
| LOC110509700 | LOC106563141 | coding | downstream | 1479769 | 14973955 ~ 15000591 (-) |
| LOC110509329 | NA | coding | downstream | 1533246 | 14945612 ~ 14947114 (-) |
| stxbp1a | LOC106563129 | coding | upstream | 177799 | 16658386 ~ 16701533 (-) |
| slc31a2 | copt2 | coding | upstream | 284758 | 16765345 ~ 16776377 (-) |
| LOC110509719 | fut7 | coding | upstream | 378333 | 16858920 ~ 16866531 (-) |
| LOC110509724 | LOC106563119 | coding | upstream | 585775 | 17066362 ~ 17093537 (-) |
| LOC110509723 | LOC106563118 | coding | upstream | 613469 | 17094056 ~ 17135891 (-) |
| G2158022 | NA | non-coding | downstream | 7700 | 16472453 ~ 16472660 (-) |
| G2158021 | NA | non-coding | downstream | 8321 | 16471750 ~ 16472039 (-) |
| G2158016 | LOC106563130 | non-coding | downstream | 17315 | 16461404 ~ 16463045 (-) |
| G2157764 | NA | non-coding | downstream | 28586 | 16447711 ~ 16451774 (-) |
| G2157552 | NA | non-coding | downstream | 192190 | 16287939 ~ 16288170 (-) |
| G2158029 | NA | non-coding | upstream | 3260 | 16483847 ~ 16484130 (-) |
| G2158035 | NA | non-coding | upstream | 8580 | 16489167 ~ 16489417 (-) |
| G2158036 | NA | non-coding | upstream | 10256 | 16490843 ~ 16491051 (-) |
| G2158037 | NA | non-coding | upstream | 11035 | 16491622 ~ 16491898 (-) |
| G2158051 | NA | non-coding | upstream | 38122 | 16518709 ~ 16518931 (-) |
| G2157743 | NA | other | downstream | 56939 | 16421677 ~ 16423421 (-) |
| G2157715 | NA | other | downstream | 94315 | 16381190 ~ 16386045 (-) |
| G2155120 | NA | other | downstream | 2249354 | 14227820 ~ 14231006 (-) |
| G2155063 | LOC106563020 | other | downstream | 2256429 | 14223121 ~ 14223931 (-) |
| si:ch211-202f5.3 | LOC106563025 | other | downstream | 2423481 | 14054254 ~ 14056905 (-) |
| G2158088 | LOC100136012 | other | upstream | 127038 | 16607625 ~ 16608006 (-) |
| G2158111 | akna | other | upstream | 163094 | 16643681 ~ 16646597 (-) |
| LOC110509757 | LOC106563370 | other | upstream | 2795681 | 19275539 ~ 19277044 (-) |
| G2162005 | NA | other | upstream | 3503958 | 19984545 ~ 19984779 (-) |
| G2162127 | NA | other | upstream | 3602558 | 20083145 ~ 20083618 (-) |
