G2158080



Basic Information


Item Value
gene id G2158080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 16595262 ~ 16595472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2467289
aggcctacaaacctgactcagttacaccagctctgtcaggaggaatcggccaaaattcacccaacttattgtgggaagcttgtggaaggctacccgaaacatttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacccactgggaatgtgaagaaagaaatataagctgaaataaat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2467289 True 211 lncRNA 0.40 1 16595262 16595472

Neighbor


gene id symbol gene type direction distance location
LOC110509706 LOC106563136 coding downstream 577763 15970492 ~ 16017499 (-)
LOC110509703 LOC106563138 coding downstream 1169954 15105979 ~ 15425308 (-)
LOC110509702 LOC106563139 coding downstream 1518252 15038817 ~ 15087213 (-)
LOC110509700 LOC106563141 coding downstream 1594671 14973955 ~ 15000591 (-)
LOC110509329 NA coding downstream 1648148 14945612 ~ 14947114 (-)
stxbp1a LOC106563129 coding upstream 62914 16658386 ~ 16701533 (-)
slc31a2 copt2 coding upstream 169873 16765345 ~ 16776377 (-)
LOC110509719 fut7 coding upstream 263448 16858920 ~ 16866531 (-)
LOC110509724 LOC106563119 coding upstream 470890 17066362 ~ 17093537 (-)
LOC110509723 LOC106563118 coding upstream 498584 17094056 ~ 17135891 (-)
G2158077 NA non-coding downstream 3576 16591445 ~ 16591686 (-)
G2158068 NA non-coding downstream 20019 16574988 ~ 16575243 (-)
G2158066 NA non-coding downstream 23037 16571940 ~ 16572225 (-)
G2158065 NA non-coding downstream 26984 16568074 ~ 16568278 (-)
G2158064 NA non-coding downstream 27590 16567329 ~ 16567672 (-)
G2158087 NA non-coding upstream 10722 16606194 ~ 16606407 (-)
G2158089 NA non-coding upstream 12762 16608234 ~ 16608433 (-)
G2158090 NA non-coding upstream 13336 16608808 ~ 16609041 (-)
G2158096 NA non-coding upstream 29151 16624623 ~ 16625284 (-)
G2158097 NA non-coding upstream 34023 16629495 ~ 16629972 (-)
G2157743 NA other downstream 171841 16421677 ~ 16423421 (-)
G2157715 NA other downstream 209217 16381190 ~ 16386045 (-)
G2155120 NA other downstream 2364256 14227820 ~ 14231006 (-)
G2155063 LOC106563020 other downstream 2371331 14223121 ~ 14223931 (-)
si:ch211-202f5.3 LOC106563025 other downstream 2538383 14054254 ~ 14056905 (-)
G2158088 LOC100136012 other upstream 12153 16607625 ~ 16608006 (-)
G2158111 akna other upstream 48209 16643681 ~ 16646597 (-)
LOC110509757 LOC106563370 other upstream 2680796 19275539 ~ 19277044 (-)
G2162005 NA other upstream 3389073 19984545 ~ 19984779 (-)
G2162127 NA other upstream 3487673 20083145 ~ 20083618 (-)

Expression



Co-expression Network