Gene
RNA
| Item | Value |
|---|---|
| gene id | G2158109 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 16641061 ~ 16641886 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| AT-hook-containing transcription factor-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2467318 | True | 368 | lncRNA | 0.56 | 2 | 16641061 | 16641886 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509706 | LOC106563136 | coding | downstream | 623562 | 15970492 ~ 16017499 (-) |
| LOC110509703 | LOC106563138 | coding | downstream | 1215753 | 15105979 ~ 15425308 (-) |
| LOC110509702 | LOC106563139 | coding | downstream | 1564051 | 15038817 ~ 15087213 (-) |
| LOC110509700 | LOC106563141 | coding | downstream | 1640470 | 14973955 ~ 15000591 (-) |
| LOC110509329 | NA | coding | downstream | 1693947 | 14945612 ~ 14947114 (-) |
| stxbp1a | LOC106563129 | coding | upstream | 16500 | 16658386 ~ 16701533 (-) |
| slc31a2 | copt2 | coding | upstream | 123459 | 16765345 ~ 16776377 (-) |
| LOC110509719 | fut7 | coding | upstream | 217034 | 16858920 ~ 16866531 (-) |
| LOC110509724 | LOC106563119 | coding | upstream | 424476 | 17066362 ~ 17093537 (-) |
| LOC110509723 | LOC106563118 | coding | upstream | 452170 | 17094056 ~ 17135891 (-) |
| G2158108 | NA | non-coding | downstream | 107 | 16640735 ~ 16640954 (-) |
| G2158107 | NA | non-coding | downstream | 358 | 16640078 ~ 16640703 (-) |
| G2158101 | akna | non-coding | downstream | 5267 | 16635422 ~ 16635794 (-) |
| G2158097 | NA | non-coding | downstream | 11089 | 16629495 ~ 16629972 (-) |
| G2158096 | NA | non-coding | downstream | 15777 | 16624623 ~ 16625284 (-) |
| G2158149 | NA | non-coding | upstream | 61701 | 16703587 ~ 16704085 (-) |
| G2158198 | LOC106567281 | non-coding | upstream | 155015 | 16796901 ~ 16799275 (-) |
| G2158213 | NA | non-coding | upstream | 199515 | 16841401 ~ 16843760 (-) |
| G2158264 | NA | non-coding | upstream | 239022 | 16880908 ~ 16881194 (-) |
| G2158274 | NA | non-coding | upstream | 251890 | 16893776 ~ 16894001 (-) |
| G2158088 | LOC100136012 | other | downstream | 33055 | 16607625 ~ 16608006 (-) |
| G2157743 | NA | other | downstream | 217640 | 16421677 ~ 16423421 (-) |
| G2157715 | NA | other | downstream | 255016 | 16381190 ~ 16386045 (-) |
| G2155120 | NA | other | downstream | 2410055 | 14227820 ~ 14231006 (-) |
| G2155063 | LOC106563020 | other | downstream | 2417130 | 14223121 ~ 14223931 (-) |
| G2158111 | akna | other | upstream | 1795 | 16643681 ~ 16646597 (-) |
| LOC110509757 | LOC106563370 | other | upstream | 2634382 | 19275539 ~ 19277044 (-) |
| G2162005 | NA | other | upstream | 3342659 | 19984545 ~ 19984779 (-) |
| G2162127 | NA | other | upstream | 3441259 | 20083145 ~ 20083618 (-) |
| LOC110509788 | LOC106563294 | other | upstream | 3446344 | 20088225 ~ 20093695 (-) |
