G2158111 (akna)


Basic Information

Item Value
gene id G2158111
gene name akna
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 16643681 ~ 16646597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2467320
CGGTTGGTCAGCTGACCAGAGCTCAGGGCTCGGAGGGGATCGCCATGGTGATAGGGTGCAGTGGGGGAGGGGCTTGGCTGGCAGCGATGCTGGGTTGTTCGGGTGGAACGGTCACTTCGTCCCTCATCCTCCCCTGACGCAGAGTGGATGTGGTCACTGTCTGGTCCAAACTCACTGGTGCCACTGCCAGCCCAGGGCTGGGGGGTCCTGCTGGCCCTGTGCTGGGGGGAGCTGGAGGCTGAGGtgcccctcctttcctcccctctggtTCTCCCTGAAGACCCCCGTACCTGCCTTGGGGTGCTCAGACGAGAGCCTCCACAGTGCTCCAGCAAGGTTGGTCTCTGTGGTCTGTGTGAGGGGGtgcaggaagaggggagaggctgCCCTGACACGGGGGATGTGTGTTGGGGCTTCCCTGG

Function

symbol description
akna Orthologous to human AKNA (AT-hook transcription factor).

NR:

description
AT-hook-containing transcription factor-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2467320 True 422 TUCP 0.65 2 16643681 16646597

Neighbor

gene id symbol gene type direction distance location
LOC110509706 LOC106563136 coding downstream 626182 15970492 ~ 16017499 (-)
LOC110509703 LOC106563138 coding downstream 1218373 15105979 ~ 15425308 (-)
LOC110509702 LOC106563139 coding downstream 1566671 15038817 ~ 15087213 (-)
LOC110509700 LOC106563141 coding downstream 1643090 14973955 ~ 15000591 (-)
LOC110509329 NA coding downstream 1696567 14945612 ~ 14947114 (-)
stxbp1a LOC106563129 coding upstream 11789 16658386 ~ 16701533 (-)
slc31a2 copt2 coding upstream 118748 16765345 ~ 16776377 (-)
LOC110509719 fut7 coding upstream 212323 16858920 ~ 16866531 (-)
LOC110509724 LOC106563119 coding upstream 419765 17066362 ~ 17093537 (-)
LOC110509723 LOC106563118 coding upstream 447459 17094056 ~ 17135891 (-)
G2158109 NA non-coding downstream 1795 16641061 ~ 16641886 (-)
G2158108 NA non-coding downstream 2727 16640735 ~ 16640954 (-)
G2158107 NA non-coding downstream 2978 16640078 ~ 16640703 (-)
G2158101 akna non-coding downstream 7887 16635422 ~ 16635794 (-)
G2158097 NA non-coding downstream 13709 16629495 ~ 16629972 (-)
G2158149 NA non-coding upstream 56990 16703587 ~ 16704085 (-)
G2158198 LOC106567281 non-coding upstream 150304 16796901 ~ 16799275 (-)
G2158213 NA non-coding upstream 194804 16841401 ~ 16843760 (-)
G2158264 NA non-coding upstream 234311 16880908 ~ 16881194 (-)
G2158274 NA non-coding upstream 247179 16893776 ~ 16894001 (-)
G2158088 LOC100136012 other downstream 35675 16607625 ~ 16608006 (-)
G2157743 NA other downstream 220260 16421677 ~ 16423421 (-)
G2157715 NA other downstream 257636 16381190 ~ 16386045 (-)
G2155120 NA other downstream 2412675 14227820 ~ 14231006 (-)
G2155063 LOC106563020 other downstream 2419750 14223121 ~ 14223931 (-)
LOC110509757 LOC106563370 other upstream 2629671 19275539 ~ 19277044 (-)
G2162005 NA other upstream 3337948 19984545 ~ 19984779 (-)
G2162127 NA other upstream 3436548 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 3441633 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 3662592 20309189 ~ 20309802 (-)

Expression


Co-expression Network