G2158213


Basic Information

Item Value
gene id G2158213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 16841401 ~ 16843760 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2467430
ttttcccttttgtaatttacctatttgcacatcgttataacactctatatagccataatatgacatttgaaattccTCTATTAATTTGAAACTTTTGTGATtgtaattttaatacatttttgattgTTTAGTATCTATTTCACATGCTTTGGCAACgtaaacatacgtttcccatgccaataaagccctttgaattgaattgaattgaatagagagagacagagagagtgagcaagagagaggagacaggagaggagtgtgagagagagaaagaaaacgagACAGAGATGCATACTGTGCATTGTCCTTTTGCAAGCTTCACTTGAGGTAAAAACGTTTAATTCAGAAGCGAGGCCTGCATGTACAAAAATATACAAGTGAACAGTTTCACTCTTTCTATGCACATTTTGGAACGCCAGGGTTGGAACTGACAGGGACGAAAGAGAGAAGAAAATACTAGAGAGTGACATCCACCACGGATCATCAATCCTATAGACGTTCTTACTAAGGTGTACATATCAATTTACATGTCTCCTCCAGTTACACATAGGAGGTCGAATCAAAGTGATTATCATATTCAAACATGTCGGAATCAAACCAAGCATGAGAAATCATCTGATACTACATTTTCCAATATGCTTTCTTAAATCTACAATATTGATTTAACAAGTTGAAATTTGCTACACCAAATGACAAGAACTTCATCCTAAACCCTGTTTTTGGAAGATACGAATAGACAGACATCACAAATATGtgacatacatttttttgcatCCATAAAAATAGTACTTCAAAGATTATATCACAGTATATCATGAGAGTGTCCCCTTGTGTTCCTCTTGCTCCTTGGCCAAATGCCAAGCACTTTTCATGAAAAACCCTTCATGTGTACCAGTATCTACAGTTTAAATGATCTGGGGTTAGCTACTAGCTATGCATGGCTAATAGAGTAAGGGACtgttttgatgtgtgtgtgtctgcacaattgatgtgtgtgtgtgtctgcacataTGTGTGTTCTATGtgctatatatttatatatatattaggtcATTGTACCACATTCAAACAGAGGCTTTGGGAGATAATAACGGACATTACAAAGGCGAGCAATTGAAACACTGattctaagagagagagaaaccgagcaGCATGTTCTagcctcctgccaaatgtatgaccatattagagagacatatttcccacCGATTACACAGACCCAGAAAGAAtatgaaaacaaatccaatcttgATAAAACGGCCACgtctattaggtgaaataccacagtgtgccaccaCATCAGTAAGATTTGAGACCTGTTGCCTCAAGAAAGGGGCAACAAGTGGagcacaaacaccattgtaaatacaacctgtatttatctgtttatttattttccctttcataATTCAATTACTTGGACATTGTTGCAACACTGtgccaataatataacatttgaaatgtctatattcttTAAAAACTTTTGTGAGTAATGTTAACTGTTCGTTTCTGATGGTCTTTtccttgtttatttcacttttgtttgttgtccatttcatttgctttggcaatgtaaacatttgtTTCCCATAGTAATGTTCTCGTTGTGAGATTCAATTACAAACCAGCTTAAAAGACCAAGGAAAGGTGCAAAGACATGAAACAACAAATTATATTCAAAAGGAACACCGTCTTTTACTGGAAAGTACAGGGGACTAGGGCCTTTTGTATGATAGAAACACCCTACTAGTGACCAAGTCCTAGGATACAGGAAGGTTGtctacatcccaaatagcaccatacaccctatgtagtgcactacttttgacctggacccatagggttctggccaaaagtagtgcactatatagggtgtaaGGGTGCCATTAGAGACATATATCTTGAGTTTCATACATCTGTCAACCTCCTGCCTCTTCATTTCCTCTTATATAAGCCCATCCAGTTCTAAGATTGGAGAGTTCACGTGCTATTCTTCCAGAGTACaagaaatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcaggcatgAACATCTATGGGTTTCACATGGGATTCCcttggtagtgtagtgtagagtcgTTAAACAAAGGATTCTTCACTTCCATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2467430 True 2133 lncRNA 0.38 2 16841401 16843760

Neighbor

gene id symbol gene type direction distance location
slc31a2 copt2 coding downstream 65024 16765345 ~ 16776377 (-)
stxbp1a LOC106563129 coding downstream 139868 16658386 ~ 16701533 (-)
LOC110509706 LOC106563136 coding downstream 823902 15970492 ~ 16017499 (-)
LOC110509703 LOC106563138 coding downstream 1416093 15105979 ~ 15425308 (-)
LOC110509702 LOC106563139 coding downstream 1764391 15038817 ~ 15087213 (-)
LOC110509719 fut7 coding upstream 15160 16858920 ~ 16866531 (-)
LOC110509724 LOC106563119 coding upstream 222602 17066362 ~ 17093537 (-)
LOC110509723 LOC106563118 coding upstream 250296 17094056 ~ 17135891 (-)
LOC110509725 LOC106563120 coding upstream 292490 17136250 ~ 17139610 (-)
adora2ab LOC106563117 coding upstream 300492 17144252 ~ 17149259 (-)
G2158198 LOC106567281 non-coding downstream 42126 16796901 ~ 16799275 (-)
G2158149 NA non-coding downstream 137316 16703587 ~ 16704085 (-)
G2158109 NA non-coding downstream 199515 16641061 ~ 16641886 (-)
G2158108 NA non-coding downstream 200447 16640735 ~ 16640954 (-)
G2158107 NA non-coding downstream 200698 16640078 ~ 16640703 (-)
G2158264 NA non-coding upstream 37148 16880908 ~ 16881194 (-)
G2158274 NA non-coding upstream 50016 16893776 ~ 16894001 (-)
G2158281 LOC106563121 non-coding upstream 57057 16900817 ~ 16912573 (-)
G2158293 NA non-coding upstream 80478 16924238 ~ 16924646 (-)
G2158360 NA non-coding upstream 114047 16957807 ~ 17043172 (-)
G2158111 akna other downstream 194804 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 233395 16607625 ~ 16608006 (-)
G2157743 NA other downstream 417980 16421677 ~ 16423421 (-)
G2157715 NA other downstream 455356 16381190 ~ 16386045 (-)
G2155120 NA other downstream 2610395 14227820 ~ 14231006 (-)
LOC110509757 LOC106563370 other upstream 2432508 19275539 ~ 19277044 (-)
G2162005 NA other upstream 3140785 19984545 ~ 19984779 (-)
G2162127 NA other upstream 3239385 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 3244470 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 3465429 20309189 ~ 20309802 (-)

Expression


Co-expression Network