Gene
RNA
| Item | Value |
|---|---|
| gene id | G2158420 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 17063503 ~ 17063912 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2467694 | True | 410 | lncRNA | 0.45 | 1 | 17063503 | 17063912 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509722 | LOC106563145 | coding | upstream | 24801 | 16987866 ~ 17038702 (+) |
| LOC110509336 | LOC106563121 | coding | upstream | 114428 | 16900728 ~ 16949075 (+) |
| clic3 | LOC106563124 | coding | upstream | 185472 | 16812866 ~ 16878031 (+) |
| pou5f3 | LOC106563125 | coding | upstream | 203697 | 16855976 ~ 16859806 (+) |
| npdc1a | npdc1 | coding | upstream | 220269 | 16799642 ~ 16843234 (+) |
| LOC110509731 | LOC106563154 | coding | downstream | 327183 | 17391095 ~ 17394366 (+) |
| LOC110509337 | noc4l | coding | downstream | 331938 | 17395850 ~ 17399424 (+) |
| LOC110509732 | vps29 | coding | downstream | 336331 | 17400243 ~ 17406305 (+) |
| LOC110509733 | LOC106566318 | coding | downstream | 348649 | 17412561 ~ 17415939 (+) |
| arpc3 | arpc3 | coding | downstream | 352141 | 17416053 ~ 17419229 (+) |
| G2158313 | NA | non-coding | upstream | 20524 | 16957456 ~ 17042979 (+) |
| G2158312 | NA | non-coding | upstream | 106105 | 16957039 ~ 16957398 (+) |
| G2157996 | NA | non-coding | upstream | 178129 | 16885059 ~ 16885374 (+) |
| G2157891 | NA | non-coding | upstream | 361923 | 16677948 ~ 16701580 (+) |
| G2158427 | LOC106563119 | non-coding | downstream | 6775 | 17070687 ~ 17093509 (+) |
| G2158464 | LOC106563120 | non-coding | downstream | 72333 | 17136245 ~ 17136879 (+) |
| G2158467 | NA | non-coding | downstream | 132810 | 17196722 ~ 17197415 (+) |
| G2158459 | NA | non-coding | downstream | 134547 | 17198459 ~ 17200589 (+) |
| G2158460 | NA | non-coding | downstream | 137024 | 17200936 ~ 17202539 (+) |
| G2157602 | NA | other | upstream | 709838 | 16350717 ~ 16353665 (+) |
| G2155696 | NA | other | upstream | 1969554 | 15018627 ~ 15093949 (+) |
| G2154512 | NA | other | upstream | 3127684 | 13915670 ~ 13935819 (+) |
| G2154438 | NA | other | upstream | 3249533 | 13806013 ~ 13813970 (+) |
| G2154391 | NA | other | upstream | 3287369 | 13772708 ~ 13776134 (+) |
| G2158499 | LOC106563144 | other | downstream | 125432 | 17189344 ~ 17191128 (+) |
| LOC110509751 | LOC106563328 | other | downstream | 1996631 | 18962089 ~ 19065920 (+) |
| LOC118945267 | NA | other | downstream | 2002266 | 19066137 ~ 19068784 (+) |
| LOC110509753 | LOC106563373 | other | downstream | 2072757 | 19136428 ~ 19138160 (+) |
| LOC110509766 | LOC106566689 | other | downstream | 2546977 | 19609602 ~ 19616511 (+) |
