Gene
RNA
| Item | Value |
|---|---|
| gene id | G2158427 |
| gene name | LOC106563119 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 17070687 ~ 17093509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: dual specificity testis-specific protein kinase 2-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2467701 | True | 1075 | lncRNA | 0.50 | 5 | 17070687 | 17093509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509722 | LOC106563145 | coding | upstream | 31985 | 16987866 ~ 17038702 (+) |
| LOC110509336 | LOC106563121 | coding | upstream | 121612 | 16900728 ~ 16949075 (+) |
| clic3 | LOC106563124 | coding | upstream | 192656 | 16812866 ~ 16878031 (+) |
| pou5f3 | LOC106563125 | coding | upstream | 210881 | 16855976 ~ 16859806 (+) |
| npdc1a | npdc1 | coding | upstream | 227453 | 16799642 ~ 16843234 (+) |
| LOC110509731 | LOC106563154 | coding | downstream | 297586 | 17391095 ~ 17394366 (+) |
| LOC110509337 | noc4l | coding | downstream | 302341 | 17395850 ~ 17399424 (+) |
| LOC110509732 | vps29 | coding | downstream | 306734 | 17400243 ~ 17406305 (+) |
| LOC110509733 | LOC106566318 | coding | downstream | 319052 | 17412561 ~ 17415939 (+) |
| arpc3 | arpc3 | coding | downstream | 322544 | 17416053 ~ 17419229 (+) |
| G2158420 | NA | non-coding | upstream | 6775 | 17063503 ~ 17063912 (+) |
| G2158313 | NA | non-coding | upstream | 27708 | 16957456 ~ 17042979 (+) |
| G2158312 | NA | non-coding | upstream | 113289 | 16957039 ~ 16957398 (+) |
| G2157996 | NA | non-coding | upstream | 185313 | 16885059 ~ 16885374 (+) |
| G2158464 | LOC106563120 | non-coding | downstream | 42736 | 17136245 ~ 17136879 (+) |
| G2158467 | NA | non-coding | downstream | 103213 | 17196722 ~ 17197415 (+) |
| G2158459 | NA | non-coding | downstream | 104950 | 17198459 ~ 17200589 (+) |
| G2158460 | NA | non-coding | downstream | 107427 | 17200936 ~ 17202539 (+) |
| G2158465 | NA | non-coding | downstream | 109398 | 17202907 ~ 17203208 (+) |
| G2157602 | NA | other | upstream | 717022 | 16350717 ~ 16353665 (+) |
| G2155696 | NA | other | upstream | 1976738 | 15018627 ~ 15093949 (+) |
| G2154512 | NA | other | upstream | 3134868 | 13915670 ~ 13935819 (+) |
| G2154438 | NA | other | upstream | 3256717 | 13806013 ~ 13813970 (+) |
| G2154391 | NA | other | upstream | 3294553 | 13772708 ~ 13776134 (+) |
| G2158499 | LOC106563144 | other | downstream | 95835 | 17189344 ~ 17191128 (+) |
| LOC110509751 | LOC106563328 | other | downstream | 1967034 | 18962089 ~ 19065920 (+) |
| LOC118945267 | NA | other | downstream | 1972669 | 19066137 ~ 19068784 (+) |
| LOC110509753 | LOC106563373 | other | downstream | 2043160 | 19136428 ~ 19138160 (+) |
| LOC110509766 | LOC106566689 | other | downstream | 2517380 | 19609602 ~ 19616511 (+) |
