Gene
RNA
| Item | Value |
|---|---|
| gene id | G2158461 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 17204549 ~ 17205124 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2467737 | True | 576 | lncRNA | 0.47 | 1 | 17204549 | 17205124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509722 | LOC106563145 | coding | upstream | 165847 | 16987866 ~ 17038702 (+) |
| LOC110509336 | LOC106563121 | coding | upstream | 255474 | 16900728 ~ 16949075 (+) |
| clic3 | LOC106563124 | coding | upstream | 326518 | 16812866 ~ 16878031 (+) |
| pou5f3 | LOC106563125 | coding | upstream | 344743 | 16855976 ~ 16859806 (+) |
| npdc1a | npdc1 | coding | upstream | 361315 | 16799642 ~ 16843234 (+) |
| LOC110509731 | LOC106563154 | coding | downstream | 185971 | 17391095 ~ 17394366 (+) |
| LOC110509337 | noc4l | coding | downstream | 190726 | 17395850 ~ 17399424 (+) |
| LOC110509732 | vps29 | coding | downstream | 195119 | 17400243 ~ 17406305 (+) |
| LOC110509733 | LOC106566318 | coding | downstream | 207437 | 17412561 ~ 17415939 (+) |
| arpc3 | arpc3 | coding | downstream | 210929 | 17416053 ~ 17419229 (+) |
| G2158465 | NA | non-coding | upstream | 1341 | 17202907 ~ 17203208 (+) |
| G2158460 | NA | non-coding | upstream | 2010 | 17200936 ~ 17202539 (+) |
| G2158459 | NA | non-coding | upstream | 3960 | 17198459 ~ 17200589 (+) |
| G2158467 | NA | non-coding | upstream | 7134 | 17196722 ~ 17197415 (+) |
| G2158464 | LOC106563120 | non-coding | upstream | 67670 | 17136245 ~ 17136879 (+) |
| G2158502 | NA | non-coding | downstream | 1335 | 17206459 ~ 17206679 (+) |
| G2158505 | NA | non-coding | downstream | 10094 | 17215218 ~ 17215419 (+) |
| G2158506 | NA | non-coding | downstream | 12565 | 17217689 ~ 17218042 (+) |
| G2158508 | NA | non-coding | downstream | 15591 | 17220715 ~ 17220940 (+) |
| G2158509 | NA | non-coding | downstream | 16437 | 17221561 ~ 17221818 (+) |
| G2158499 | LOC106563144 | other | upstream | 13421 | 17189344 ~ 17191128 (+) |
| G2157602 | NA | other | upstream | 850884 | 16350717 ~ 16353665 (+) |
| G2155696 | NA | other | upstream | 2110600 | 15018627 ~ 15093949 (+) |
| G2154512 | NA | other | upstream | 3268730 | 13915670 ~ 13935819 (+) |
| G2154438 | NA | other | upstream | 3390579 | 13806013 ~ 13813970 (+) |
| LOC110509751 | LOC106563328 | other | downstream | 1855419 | 18962089 ~ 19065920 (+) |
| LOC118945267 | NA | other | downstream | 1861054 | 19066137 ~ 19068784 (+) |
| LOC110509753 | LOC106563373 | other | downstream | 1931545 | 19136428 ~ 19138160 (+) |
| LOC110509766 | LOC106566689 | other | downstream | 2405765 | 19609602 ~ 19616511 (+) |
| G2161635 | LOC106563312 | other | downstream | 2536690 | 19741814 ~ 19752743 (+) |
