G2159320


Basic Information

Item Value
gene id G2159320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 17802552 ~ 17901313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2468676
ctaatgaacttatcctctgcagcagaggtaactctgggtcttcctttcctgtggcggtcctcatgagagccagttaactctgatgaacttatcctctgcagcagaggtaactctgggtcttcctttcctgtggcggtcctcatgagagacagtttcatcgcagcgcttgatggttttgcgactgaagtttttgacattttctggattgactgaccttcatgtcttaaagtaatgattgactgtcgtttttc

Function

NR:

description
hypothetical protein EH28_19535

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2468676 True 251 lncRNA 0.46 2 17802552 17901313

Neighbor

gene id symbol gene type direction distance location
arpc3 arpc3 coding upstream 383323 17416053 ~ 17419229 (+)
LOC110509733 LOC106566318 coding upstream 386613 17412561 ~ 17415939 (+)
LOC110509732 vps29 coding upstream 396247 17400243 ~ 17406305 (+)
LOC110509337 noc4l coding upstream 403128 17395850 ~ 17399424 (+)
LOC110509731 LOC106563154 coding upstream 408186 17391095 ~ 17394366 (+)
LOC110509739 LOC106563160 coding downstream 374630 18275943 ~ 18282836 (+)
LOC110509741 LOC106563161 coding downstream 387425 18288738 ~ 18380940 (+)
si:dkey-1d7.3 LOC106563162 coding downstream 491626 18392939 ~ 18442193 (+)
LOC110509745 LOC106563165 coding downstream 865166 18766479 ~ 18783952 (+)
LOC110509747 LOC106563168 coding downstream 907499 18808812 ~ 18823742 (+)
G2159319 NA non-coding upstream 764 17801575 ~ 17801788 (+)
G2158872 sfswap non-coding upstream 1834 17789285 ~ 17800718 (+)
G2158803 LOC106563159 non-coding upstream 13518 17766791 ~ 17789034 (+)
G2158786 NA non-coding upstream 144894 17653333 ~ 17657658 (+)
G2158645 NA non-coding upstream 370500 17428410 ~ 17432052 (+)
G2159412 NA non-coding downstream 29828 17931141 ~ 17933475 (+)
G2159656 NA non-coding downstream 149161 18050474 ~ 18050858 (+)
G2159688 NA non-coding downstream 171123 18072436 ~ 18072754 (+)
G2159710 NA non-coding downstream 187803 18089116 ~ 18089518 (+)
G2159785 NA non-coding downstream 245333 18146646 ~ 18146902 (+)
G2158499 LOC106563144 other upstream 611424 17189344 ~ 17191128 (+)
G2157602 NA other upstream 1448887 16350717 ~ 16353665 (+)
G2155696 NA other upstream 2708603 15018627 ~ 15093949 (+)
G2154512 NA other upstream 3866733 13915670 ~ 13935819 (+)
G2154438 NA other upstream 3988582 13806013 ~ 13813970 (+)
LOC110509751 LOC106563328 other downstream 1159230 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 1164865 19066137 ~ 19068784 (+)
LOC110509753 LOC106563373 other downstream 1235356 19136428 ~ 19138160 (+)
LOC110509766 LOC106566689 other downstream 1709576 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 1840501 19741814 ~ 19752743 (+)

Expression


Co-expression Network