G2159358


Basic Information

Item Value
gene id G2159358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 17860414 ~ 17863041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2468715
tctatgttcagcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgttttcaccagataggctgtttaggttttcgttacgttctttattttgtagtgtttgtattgattcgtgttttacgtttgtttattaaaacatggatcgaaatctacacgctgcattttggtccgactctccttctca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2468715 True 262 lncRNA 0.40 2 17860414 17863041

Neighbor

gene id symbol gene type direction distance location
arpc3 arpc3 coding upstream 441185 17416053 ~ 17419229 (+)
LOC110509733 LOC106566318 coding upstream 444475 17412561 ~ 17415939 (+)
LOC110509732 vps29 coding upstream 454109 17400243 ~ 17406305 (+)
LOC110509337 noc4l coding upstream 460990 17395850 ~ 17399424 (+)
LOC110509731 LOC106563154 coding upstream 466048 17391095 ~ 17394366 (+)
LOC110509739 LOC106563160 coding downstream 412902 18275943 ~ 18282836 (+)
LOC110509741 LOC106563161 coding downstream 425697 18288738 ~ 18380940 (+)
si:dkey-1d7.3 LOC106563162 coding downstream 529898 18392939 ~ 18442193 (+)
LOC110509745 LOC106563165 coding downstream 903438 18766479 ~ 18783952 (+)
LOC110509747 LOC106563168 coding downstream 945771 18808812 ~ 18823742 (+)
G2159319 NA non-coding upstream 58626 17801575 ~ 17801788 (+)
G2158872 sfswap non-coding upstream 59696 17789285 ~ 17800718 (+)
G2158803 LOC106563159 non-coding upstream 71380 17766791 ~ 17789034 (+)
G2158786 NA non-coding upstream 202756 17653333 ~ 17657658 (+)
G2158645 NA non-coding upstream 428362 17428410 ~ 17432052 (+)
G2159412 NA non-coding downstream 68100 17931141 ~ 17933475 (+)
G2159656 NA non-coding downstream 187433 18050474 ~ 18050858 (+)
G2159688 NA non-coding downstream 209395 18072436 ~ 18072754 (+)
G2159710 NA non-coding downstream 226075 18089116 ~ 18089518 (+)
G2159785 NA non-coding downstream 283605 18146646 ~ 18146902 (+)
G2158499 LOC106563144 other upstream 669286 17189344 ~ 17191128 (+)
G2157602 NA other upstream 1506749 16350717 ~ 16353665 (+)
G2155696 NA other upstream 2766465 15018627 ~ 15093949 (+)
G2154512 NA other upstream 3924595 13915670 ~ 13935819 (+)
G2154438 NA other upstream 4046444 13806013 ~ 13813970 (+)
LOC110509751 LOC106563328 other downstream 1197502 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 1203137 19066137 ~ 19068784 (+)
LOC110509753 LOC106563373 other downstream 1273628 19136428 ~ 19138160 (+)
LOC110509766 LOC106566689 other downstream 1747848 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 1878773 19741814 ~ 19752743 (+)

Expression


Co-expression Network