G2159412


Basic Information

Item Value
gene id G2159412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 17931141 ~ 17933475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2468771
aaacaataaatgtaaCGTGAAATACCGAAACCAGTACCGTGtggtgtaaaacacagacacggaaacaatcacccacaaacaaacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaacgacacctgcctctgattgagaaccatactaggccgaacacagaaaaacaacctagacacacaaaacatagaatgcccacccaactcacgtcctgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2468771 True 229 lncRNA 0.43 2 17931141 17933475

Neighbor

gene id symbol gene type direction distance location
arpc3 arpc3 coding upstream 511912 17416053 ~ 17419229 (+)
LOC110509733 LOC106566318 coding upstream 515202 17412561 ~ 17415939 (+)
LOC110509732 vps29 coding upstream 524836 17400243 ~ 17406305 (+)
LOC110509337 noc4l coding upstream 531717 17395850 ~ 17399424 (+)
LOC110509731 LOC106563154 coding upstream 536775 17391095 ~ 17394366 (+)
LOC110509739 LOC106563160 coding downstream 342468 18275943 ~ 18282836 (+)
LOC110509741 LOC106563161 coding downstream 355263 18288738 ~ 18380940 (+)
si:dkey-1d7.3 LOC106563162 coding downstream 459464 18392939 ~ 18442193 (+)
LOC110509745 LOC106563165 coding downstream 833004 18766479 ~ 18783952 (+)
LOC110509747 LOC106563168 coding downstream 875337 18808812 ~ 18823742 (+)
G2159320 NA non-coding upstream 29828 17802552 ~ 17901313 (+)
G2159358 NA non-coding upstream 68100 17860414 ~ 17863041 (+)
G2159319 NA non-coding upstream 129353 17801575 ~ 17801788 (+)
G2158872 sfswap non-coding upstream 130423 17789285 ~ 17800718 (+)
G2158803 LOC106563159 non-coding upstream 142107 17766791 ~ 17789034 (+)
G2159656 NA non-coding downstream 116999 18050474 ~ 18050858 (+)
G2159688 NA non-coding downstream 138961 18072436 ~ 18072754 (+)
G2159710 NA non-coding downstream 155641 18089116 ~ 18089518 (+)
G2159785 NA non-coding downstream 213171 18146646 ~ 18146902 (+)
G2159791 NA non-coding downstream 219956 18153431 ~ 18153812 (+)
G2158499 LOC106563144 other upstream 740013 17189344 ~ 17191128 (+)
G2157602 NA other upstream 1577476 16350717 ~ 16353665 (+)
G2155696 NA other upstream 2837192 15018627 ~ 15093949 (+)
G2154512 NA other upstream 3995322 13915670 ~ 13935819 (+)
G2154438 NA other upstream 4117171 13806013 ~ 13813970 (+)
LOC110509751 LOC106563328 other downstream 1127068 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 1132703 19066137 ~ 19068784 (+)
LOC110509753 LOC106563373 other downstream 1203194 19136428 ~ 19138160 (+)
LOC110509766 LOC106566689 other downstream 1677414 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 1808339 19741814 ~ 19752743 (+)

Expression


Co-expression Network