G2159829


Basic Information

Item Value
gene id G2159829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 18181016 ~ 18181347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2469189
ctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggaggctatatacagggtgttacggtacagagtcaatgtgtaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccgttacagagtcaatgtggaggctatatacagggggtaccgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2469189 True 332 lncRNA 0.50 1 18181016 18181347

Neighbor

gene id symbol gene type direction distance location
arpc3 arpc3 coding upstream 761787 17416053 ~ 17419229 (+)
LOC110509733 LOC106566318 coding upstream 765077 17412561 ~ 17415939 (+)
LOC110509732 vps29 coding upstream 774711 17400243 ~ 17406305 (+)
LOC110509337 noc4l coding upstream 781592 17395850 ~ 17399424 (+)
LOC110509731 LOC106563154 coding upstream 786650 17391095 ~ 17394366 (+)
LOC110509739 LOC106563160 coding downstream 94596 18275943 ~ 18282836 (+)
LOC110509741 LOC106563161 coding downstream 107391 18288738 ~ 18380940 (+)
si:dkey-1d7.3 LOC106563162 coding downstream 211592 18392939 ~ 18442193 (+)
LOC110509745 LOC106563165 coding downstream 585132 18766479 ~ 18783952 (+)
LOC110509747 LOC106563168 coding downstream 627465 18808812 ~ 18823742 (+)
G2159808 NA non-coding upstream 16392 18164412 ~ 18164624 (+)
G2159795 NA non-coding upstream 24758 18156051 ~ 18156258 (+)
G2159794 NA non-coding upstream 25545 18155256 ~ 18155471 (+)
G2159791 NA non-coding upstream 27204 18153431 ~ 18153812 (+)
G2159785 NA non-coding upstream 34114 18146646 ~ 18146902 (+)
G2159873 NA non-coding downstream 205644 18386991 ~ 18389764 (+)
G2160139 NA non-coding downstream 264967 18446314 ~ 18446621 (+)
G2160145 NA non-coding downstream 276779 18458126 ~ 18458362 (+)
G2160306 NA non-coding downstream 513551 18694898 ~ 18695157 (+)
G2160321 NA non-coding downstream 534356 18715703 ~ 18715936 (+)
G2158499 LOC106563144 other upstream 989888 17189344 ~ 17191128 (+)
G2157602 NA other upstream 1827351 16350717 ~ 16353665 (+)
G2155696 NA other upstream 3087067 15018627 ~ 15093949 (+)
G2154512 NA other upstream 4245197 13915670 ~ 13935819 (+)
G2154438 NA other upstream 4367046 13806013 ~ 13813970 (+)
LOC110509751 LOC106563328 other downstream 879196 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 884831 19066137 ~ 19068784 (+)
LOC110509753 LOC106563373 other downstream 955322 19136428 ~ 19138160 (+)
LOC110509766 LOC106566689 other downstream 1429542 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 1560467 19741814 ~ 19752743 (+)

Expression


Co-expression Network