G2160008


Basic Information

Item Value
gene id G2160008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 18257333 ~ 18280982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2469378
TCTGTTTTAATTTCAAGTCACATTTATTTCCAACGGTCATTACAGGTAAACAGCACAAACATCACACAAACAGAGGCAAGGGCCATGGCTAACATTTCACAGTTTGTACACTTCTACAGGCAGTTTGCATAGCAGTTCTGTGCTTAACCTATCGGGAAGCTCTATGGTGTGATACCATCTTCCCTTCATCAAATGTGACGCTAGACTCCTGAGAGATTAGGTTCTCTGTGATAAATCTAATAAAAGCTTCAGGCGTGCGACATTAGCTTCACAGCGTTACAAATGATTGGCTGACCTTGAACGGGACATTAGCTTCATTCACAGTGCTAACTTGAATGGCATGTTCAGTGGCAGCAGGACAAGCTATGGTTATAGTGGCTCATTTGACAGCAGTGGGTTTTGGTTCGTTGGGGACGGCGGTGGTGTTGCTCTTGAAAAGGCTGGGGAAACGGGGGAAAAGTCTTACCCTGCGCGCCGCTTTCTGGTACCGCACTGCCTTCTTGGTTTCCACTTTGGCCACGCCGATGTACTCTGCTGCACTGCTCACGTTCTTCTCTATGGTAAAGATCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2469378 True 570 lncRNA 0.47 2 18257333 18280982

Neighbor

gene id symbol gene type direction distance location
LOC110509738 LOC106563159 coding downstream 456584 17676432 ~ 17800749 (-)
LOC110509737 LOC106563158 coding downstream 659782 17517089 ~ 17597551 (-)
LOC110509735 LOC106563157 coding downstream 779769 17428405 ~ 17477564 (-)
LOC110509734 ub2g1 coding downstream 831820 17419279 ~ 17425513 (-)
LOC110509730 LOC106563153 coding downstream 873860 17340761 ~ 17383473 (-)
LOC110509743 LOC106563163 coding upstream 216950 18497932 ~ 18722649 (-)
LOC110509746 LOC106563166 coding upstream 505864 18786846 ~ 18804561 (-)
LOC118945262 LOC106563169 coding upstream 553431 18834413 ~ 18842206 (-)
LOC110509748 LOC100194644 coding upstream 561388 18842370 ~ 18848232 (-)
nefma nfm coding upstream 580968 18861950 ~ 18867753 (-)
G2159860 NA non-coding downstream 52687 18204200 ~ 18204646 (-)
G2159830 NA non-coding downstream 75950 18181018 ~ 18181383 (-)
G2159828 NA non-coding downstream 79380 18177740 ~ 18177953 (-)
G2159827 NA non-coding downstream 80591 18176491 ~ 18176742 (-)
G2159786 NA non-coding downstream 109857 18147232 ~ 18147476 (-)
G2160075 NA non-coding upstream 59860 18340842 ~ 18343942 (-)
G2160098 LOC100136012 non-coding upstream 104357 18385339 ~ 18386926 (-)
G2160377 NA non-coding upstream 162504 18443486 ~ 18443718 (-)
G2160378 NA non-coding upstream 164257 18445239 ~ 18445452 (-)
G2160541 NA non-coding upstream 397018 18678000 ~ 18678251 (-)
G2158111 akna other downstream 1610736 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 1649327 16607625 ~ 16608006 (-)
G2157743 NA other downstream 1833912 16421677 ~ 16423421 (-)
G2157715 NA other downstream 1871288 16381190 ~ 16386045 (-)
G2155120 NA other downstream 4026327 14227820 ~ 14231006 (-)
LOC110509757 LOC106563370 other upstream 995286 19275539 ~ 19277044 (-)
G2162005 NA other upstream 1703563 19984545 ~ 19984779 (-)
G2162127 NA other upstream 1802163 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 1807248 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 2028207 20309189 ~ 20309802 (-)

Expression


Co-expression Network