G2160556



Basic Information


Item Value
gene id G2160556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 18694857 ~ 18695236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2469953
gttgaaactggagcagcagcacagccaggtcgactggggacagcaaggagtcatcatgtcaggtggtcctgaggcatgatcctagggctcaggtcctccaagagagagaaagaaagagagaaagagagaaaaagagaattagagagagcatacttaaattcacacaggacaccggataagacgggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaataatggagactgagacaggaggggtcaggagacactgtggccccatccgatgattcccccggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagaggg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2469953 True 380 lncRNA 0.52 1 18694857 18695236

Neighbor


gene id symbol gene type direction distance location
LOC110509738 LOC106563159 coding downstream 894108 17676432 ~ 17800749 (-)
LOC110509737 LOC106563158 coding downstream 1097306 17517089 ~ 17597551 (-)
LOC110509735 LOC106563157 coding downstream 1217293 17428405 ~ 17477564 (-)
LOC110509734 ub2g1 coding downstream 1269344 17419279 ~ 17425513 (-)
LOC110509730 LOC106563153 coding downstream 1311384 17340761 ~ 17383473 (-)
LOC110509746 LOC106563166 coding upstream 91610 18786846 ~ 18804561 (-)
LOC118945262 LOC106563169 coding upstream 139177 18834413 ~ 18842206 (-)
LOC110509748 LOC100194644 coding upstream 147134 18842370 ~ 18848232 (-)
nefma nfm coding upstream 166714 18861950 ~ 18867753 (-)
LOC110509752 LOC106563351 coding upstream 373180 19068416 ~ 19070349 (-)
G2160541 NA non-coding downstream 16606 18678000 ~ 18678251 (-)
G2160378 NA non-coding downstream 249405 18445239 ~ 18445452 (-)
G2160377 NA non-coding downstream 251139 18443486 ~ 18443718 (-)
G2160098 LOC100136012 non-coding downstream 307931 18385339 ~ 18386926 (-)
G2160075 NA non-coding downstream 350915 18340842 ~ 18343942 (-)
G2160557 NA non-coding upstream 88 18695324 ~ 18695739 (-)
G2160561 NA non-coding upstream 8874 18704110 ~ 18704382 (-)
G2160563 NA non-coding upstream 10050 18705286 ~ 18705581 (-)
G2160588 NA non-coding upstream 38662 18733898 ~ 18734259 (-)
G2160590 NA non-coding upstream 39592 18734828 ~ 18735222 (-)
G2158111 akna other downstream 2048260 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 2086851 16607625 ~ 16608006 (-)
G2157743 NA other downstream 2271436 16421677 ~ 16423421 (-)
G2157715 NA other downstream 2308812 16381190 ~ 16386045 (-)
G2155120 NA other downstream 4463851 14227820 ~ 14231006 (-)
LOC110509757 LOC106563370 other upstream 581032 19275539 ~ 19277044 (-)
G2162005 NA other upstream 1289309 19984545 ~ 19984779 (-)
G2162127 NA other upstream 1387909 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 1392994 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 1613953 20309189 ~ 20309802 (-)

Expression



Co-expression Network