G2160306


Basic Information

Item Value
gene id G2160306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 18694898 ~ 18695157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2469694
gggttatatccttcctgtttggccctgtccgggggaatcatcggatggggccacagtgtctcctgacccctcctgtctcagtctccattatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcccgtcttatccggtgtcctgtgtgaatttaagtatgctctctctaattctctttttctctctttctctctttctttctctctcttggaggacctgagccctagga

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2469694 True 260 lncRNA 0.48 1 18694898 18695157

Neighbor

gene id symbol gene type direction distance location
si:dkey-1d7.3 LOC106563162 coding upstream 252705 18392939 ~ 18442193 (+)
LOC110509741 LOC106563161 coding upstream 313958 18288738 ~ 18380940 (+)
LOC110509739 LOC106563160 coding upstream 412062 18275943 ~ 18282836 (+)
arpc3 arpc3 coding upstream 1275669 17416053 ~ 17419229 (+)
LOC110509733 LOC106566318 coding upstream 1278959 17412561 ~ 17415939 (+)
LOC110509745 LOC106563165 coding downstream 71322 18766479 ~ 18783952 (+)
LOC110509747 LOC106563168 coding downstream 113655 18808812 ~ 18823742 (+)
LOC110509749 LOC106563330 coding downstream 158113 18853270 ~ 18856153 (+)
LOC110509751 LOC106563328 coding downstream 266932 18962089 ~ 19065920 (+)
LOC118945267 NA coding downstream 370980 19066137 ~ 19068784 (+)
G2160145 NA non-coding upstream 236536 18458126 ~ 18458362 (+)
G2160139 NA non-coding upstream 248277 18446314 ~ 18446621 (+)
G2159873 NA non-coding upstream 305134 18386991 ~ 18389764 (+)
G2159829 NA non-coding upstream 513551 18181016 ~ 18181347 (+)
G2159808 NA non-coding upstream 530274 18164412 ~ 18164624 (+)
G2160321 NA non-coding downstream 20546 18715703 ~ 18715936 (+)
G2160332 NA non-coding downstream 31700 18726857 ~ 18727057 (+)
G2160614 NA non-coding downstream 70988 18766145 ~ 18902632 (+)
G2160626 NA non-coding downstream 101827 18796984 ~ 18797824 (+)
G2160789 NA non-coding downstream 393935 19089092 ~ 19089358 (+)
G2158499 LOC106563144 other upstream 1503770 17189344 ~ 17191128 (+)
G2157602 NA other upstream 2341233 16350717 ~ 16353665 (+)
G2155696 NA other upstream 3600949 15018627 ~ 15093949 (+)
G2154512 NA other upstream 4759079 13915670 ~ 13935819 (+)
G2154438 NA other upstream 4880928 13806013 ~ 13813970 (+)
LOC110509753 LOC106563373 other downstream 441512 19136428 ~ 19138160 (+)
LOC110509766 LOC106566689 other downstream 915732 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 1046657 19741814 ~ 19752743 (+)

Expression


Co-expression Network