G2160332


Basic Information

Item Value
gene id G2160332
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 18726857 ~ 18727057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2469720
CACTTATAAAGGTGCGTTTTCAATTTAGAGAAAATACTCAACACCTATCATTTAAGTCTCAATATTAGCATTGATAAATCATGTGTCTAGACTTGTTCGATACAGACTAAGACATTGCCAGACAGACAGCATCAATTAAATATGGAAGATAAATCATTGTCAAGGAAGTCAAACTCAGAGTCAAAAATGAAAGCTCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2469720 True 201 lncRNA 0.34 1 18726857 18727057

Neighbor

gene id symbol gene type direction distance location
si:dkey-1d7.3 LOC106563162 coding upstream 284664 18392939 ~ 18442193 (+)
LOC110509741 LOC106563161 coding upstream 345917 18288738 ~ 18380940 (+)
LOC110509739 LOC106563160 coding upstream 444021 18275943 ~ 18282836 (+)
arpc3 arpc3 coding upstream 1307628 17416053 ~ 17419229 (+)
LOC110509733 LOC106566318 coding upstream 1310918 17412561 ~ 17415939 (+)
LOC110509745 LOC106563165 coding downstream 39422 18766479 ~ 18783952 (+)
LOC110509747 LOC106563168 coding downstream 81755 18808812 ~ 18823742 (+)
LOC110509749 LOC106563330 coding downstream 126213 18853270 ~ 18856153 (+)
LOC110509751 LOC106563328 coding downstream 235032 18962089 ~ 19065920 (+)
LOC118945267 NA coding downstream 339080 19066137 ~ 19068784 (+)
G2160321 NA non-coding upstream 10921 18715703 ~ 18715936 (+)
G2160306 NA non-coding upstream 31700 18694898 ~ 18695157 (+)
G2160145 NA non-coding upstream 268495 18458126 ~ 18458362 (+)
G2160139 NA non-coding upstream 280236 18446314 ~ 18446621 (+)
G2159873 NA non-coding upstream 337093 18386991 ~ 18389764 (+)
G2160614 NA non-coding downstream 39088 18766145 ~ 18902632 (+)
G2160626 NA non-coding downstream 69927 18796984 ~ 18797824 (+)
G2160789 NA non-coding downstream 362035 19089092 ~ 19089358 (+)
G2160796 NA non-coding downstream 370252 19097309 ~ 19097687 (+)
G2160798 NA non-coding downstream 376142 19103199 ~ 19103426 (+)
G2158499 LOC106563144 other upstream 1535729 17189344 ~ 17191128 (+)
G2157602 NA other upstream 2373192 16350717 ~ 16353665 (+)
G2155696 NA other upstream 3632908 15018627 ~ 15093949 (+)
G2154512 NA other upstream 4791038 13915670 ~ 13935819 (+)
G2154438 NA other upstream 4912887 13806013 ~ 13813970 (+)
LOC110509753 LOC106563373 other downstream 409612 19136428 ~ 19138160 (+)
LOC110509766 LOC106566689 other downstream 883832 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 1014757 19741814 ~ 19752743 (+)

Expression


Co-expression Network