G2161122


Basic Information

Item Value
gene id G2161122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 18929039 ~ 19010955 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2470579
AGATTTGgtgttgtgtttttaattgatgtgTAACCATGGTTagggaggccttgaaatacatctacaggtacattGACAGGTACATTacactccaattgactcaaatgttgtcaattagcctatcagaagcttctaaacccatgacataattttctggaatttcaagctgtttaaaggcacagtcaacatagtgtatgtaaacttctgacccactggaattgtgatacagtgaattataatgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatgttctaaccgacttgccaaaactatagtttgttaacaagaaatttgtggagtggttgaaaaacgagttttaatgactccaacctaagtgtatgtaaacttctgacttcaactgtaaataactattaatcaaatggccatccGGACTATTTACCACCCCTCTTTATtttaacactgctgctactcactgtttattatctatgcatagtcactttacccctacctacatgtacaaattacctcaactaacctgactctctactggtaccccctgtatatagcctcgttattgtta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2470579 True 593 lncRNA 0.36 2 18929039 19010955

Neighbor

gene id symbol gene type direction distance location
nefma nfm coding downstream 61286 18861950 ~ 18867753 (-)
LOC110509748 LOC100194644 coding downstream 80807 18842370 ~ 18848232 (-)
LOC118945262 LOC106563169 coding downstream 86833 18834413 ~ 18842206 (-)
LOC110509746 LOC106563166 coding downstream 124478 18786846 ~ 18804561 (-)
LOC110509743 LOC106563163 coding downstream 206390 18497932 ~ 18722649 (-)
LOC110509752 LOC106563351 coding upstream 57461 19068416 ~ 19070349 (-)
LOC110509754 LOC106563372 coding upstream 141065 19152020 ~ 19153708 (-)
LOC110509755 LOC106563327 coding upstream 206388 19217343 ~ 19224878 (-)
LOC110509757 LOC106563370 coding upstream 264584 19275539 ~ 19277044 (-)
LOC110509759 LOC106563326 coding upstream 346838 19307783 ~ 19409443 (-)
G2161075 LOC106566461 non-coding downstream 72894 18854996 ~ 18856145 (-)
G2160590 NA non-coding downstream 193817 18734828 ~ 18735222 (-)
G2160588 NA non-coding downstream 194780 18733898 ~ 18734259 (-)
G2160563 NA non-coding downstream 223458 18705286 ~ 18705581 (-)
G2160561 NA non-coding downstream 224657 18704110 ~ 18704382 (-)
G2161212 NA non-coding upstream 51390 19062345 ~ 19065914 (-)
G2161225 NA non-coding upstream 78188 19089143 ~ 19089464 (-)
G2161228 NA non-coding upstream 82127 19093082 ~ 19093356 (-)
G2161230 NA non-coding upstream 86316 19097271 ~ 19097660 (-)
G2161233 NA non-coding upstream 92681 19103636 ~ 19104053 (-)
G2158111 akna other downstream 2282442 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 2321033 16607625 ~ 16608006 (-)
G2157743 NA other downstream 2505618 16421677 ~ 16423421 (-)
G2157715 NA other downstream 2542994 16381190 ~ 16386045 (-)
G2155120 NA other downstream 4698033 14227820 ~ 14231006 (-)
G2162005 NA other upstream 973590 19984545 ~ 19984779 (-)
G2162127 NA other upstream 1072190 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 1077275 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 1298234 20309189 ~ 20309802 (-)

Expression


Co-expression Network