G2161230



Basic Information


Item Value
gene id G2161230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19097271 ~ 19097660 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2470693
ATTTtgtaaaatgtcgccaacaaaacaataaataacaaaaacgaccgtgaagcttacaaggGCTATAGTACCCCAAACAAAGGCAACTACCCACAATGATACaagggaaaaaaggctgcctaagtatgattcccaatcagagacaacaatagacagctgtccctgattgagaaccatacccggccaaaacatagaaatacacaaaCCTAGAAAACAGAAAattgaatgcccaccccaaatcacaccctgaccaaaccaaatagagacataaaaaggctctctaaggtcaggccgtgacaatatgacatcacacAGGGAGAAAGATGGCAGGAGCAGTGGTCCCCTGTATGTCCCGGGTTCCCCTGGTCTAGGCCGGGTTACCgtaaaagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2470693 True 390 lncRNA 0.45 1 19097271 19097660

Neighbor


gene id symbol gene type direction distance location
LOC110509752 LOC106563351 coding downstream 26922 19068416 ~ 19070349 (-)
nefma nfm coding downstream 229518 18861950 ~ 18867753 (-)
LOC110509748 LOC100194644 coding downstream 249039 18842370 ~ 18848232 (-)
LOC118945262 LOC106563169 coding downstream 255065 18834413 ~ 18842206 (-)
LOC110509746 LOC106563166 coding downstream 292710 18786846 ~ 18804561 (-)
LOC110509754 LOC106563372 coding upstream 54360 19152020 ~ 19153708 (-)
LOC110509755 LOC106563327 coding upstream 119683 19217343 ~ 19224878 (-)
LOC110509757 LOC106563370 coding upstream 177879 19275539 ~ 19277044 (-)
LOC110509759 LOC106563326 coding upstream 260133 19307783 ~ 19409443 (-)
LOC110509760 LOC106563325 coding upstream 404871 19502531 ~ 19508829 (-)
G2161228 NA non-coding downstream 3915 19093082 ~ 19093356 (-)
G2161225 NA non-coding downstream 7807 19089143 ~ 19089464 (-)
G2161212 NA non-coding downstream 31357 19062345 ~ 19065914 (-)
G2161122 NA non-coding downstream 86316 18929039 ~ 19010955 (-)
G2161075 LOC106566461 non-coding downstream 241126 18854996 ~ 18856145 (-)
G2161233 NA non-coding upstream 5976 19103636 ~ 19104053 (-)
G2161260 NA non-coding upstream 31999 19129659 ~ 19129937 (-)
G2161265 LOC106563373 non-coding upstream 39367 19137027 ~ 19138856 (-)
G2161268 NA non-coding upstream 43541 19141201 ~ 19141414 (-)
G2161280 NA non-coding upstream 58377 19156037 ~ 19156500 (-)
G2158111 akna other downstream 2450674 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 2489265 16607625 ~ 16608006 (-)
G2157743 NA other downstream 2673850 16421677 ~ 16423421 (-)
G2157715 NA other downstream 2711226 16381190 ~ 16386045 (-)
G2155120 NA other downstream 4866265 14227820 ~ 14231006 (-)
G2162005 NA other upstream 886885 19984545 ~ 19984779 (-)
G2162127 NA other upstream 985485 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 990570 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 1211529 20309189 ~ 20309802 (-)

Expression



Co-expression Network