G2160818


Basic Information

Item Value
gene id G2160818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19130314 ~ 19130530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2470245
gtgtaaggacatcagagtcaaattgtagacctgcacaaggctgggatgggctacaggacaataggcaagcagcttggtgagaaggcaacaactgttggcgcaattattagaaaatggaagaagttcaagatgacggtcaatcaccctcggtctggggctccatgcaagatctcacctcctcaatgatcatgaggaaggtgagggatcagcccagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2470245 True 217 lncRNA 0.49 1 19130314 19130530

Neighbor

gene id symbol gene type direction distance location
LOC118945267 NA coding upstream 62357 19066137 ~ 19068784 (+)
LOC110509751 LOC106563328 coding upstream 64394 18962089 ~ 19065920 (+)
LOC110509749 LOC106563330 coding upstream 274161 18853270 ~ 18856153 (+)
LOC110509747 LOC106563168 coding upstream 306572 18808812 ~ 18823742 (+)
LOC110509745 LOC106563165 coding upstream 346362 18766479 ~ 18783952 (+)
LOC110509753 LOC106563373 coding downstream 5898 19136428 ~ 19138160 (+)
c6 c6 coding downstream 39538 19170068 ~ 19204571 (+)
trnac-gca-162 NA coding downstream 88834 19219364 ~ 19219434 (+)
ghr ghr2 coding downstream 96509 19227039 ~ 19249902 (+)
LOC110509338 LOC106563371 coding downstream 141094 19271624 ~ 19273362 (+)
G2160816 NA non-coding upstream 3849 19126239 ~ 19126465 (+)
G2160798 NA non-coding upstream 26888 19103199 ~ 19103426 (+)
G2160796 NA non-coding upstream 32627 19097309 ~ 19097687 (+)
G2160789 NA non-coding upstream 40956 19089092 ~ 19089358 (+)
G2160614 NA non-coding upstream 227682 18766145 ~ 18902632 (+)
G2160823 NA non-coding downstream 9085 19139615 ~ 19139830 (+)
G2160827 NA non-coding downstream 13911 19144441 ~ 19144690 (+)
G2160854 NA non-coding downstream 47588 19178118 ~ 19178463 (+)
G2160856 NA non-coding downstream 51347 19181877 ~ 19182519 (+)
G2160912 NA non-coding downstream 158840 19289370 ~ 19295540 (+)
G2158499 LOC106563144 other upstream 1939186 17189344 ~ 17191128 (+)
G2157602 NA other upstream 2776649 16350717 ~ 16353665 (+)
G2155696 NA other upstream 4036365 15018627 ~ 15093949 (+)
LOC110509766 LOC106566689 other downstream 480359 19609602 ~ 19616511 (+)
G2161635 LOC106563312 other downstream 611284 19741814 ~ 19752743 (+)
G2161678 NA other downstream 664730 19795260 ~ 19797774 (+)
LOC110509811 LOC106563272 other downstream 2067388 21160126 ~ 21389662 (+)

Expression


Co-expression Network