Gene
RNA
| Item | Value |
|---|---|
| gene id | G2160823 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 19139615 ~ 19139830 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2470250 | True | 216 | lncRNA | 0.42 | 1 | 19139615 | 19139830 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509753 | LOC106563373 | coding | upstream | 1455 | 19136428 ~ 19138160 (+) |
| LOC118945267 | NA | coding | upstream | 71658 | 19066137 ~ 19068784 (+) |
| LOC110509751 | LOC106563328 | coding | upstream | 73695 | 18962089 ~ 19065920 (+) |
| LOC110509749 | LOC106563330 | coding | upstream | 283462 | 18853270 ~ 18856153 (+) |
| LOC110509747 | LOC106563168 | coding | upstream | 315873 | 18808812 ~ 18823742 (+) |
| c6 | c6 | coding | downstream | 30238 | 19170068 ~ 19204571 (+) |
| trnac-gca-162 | NA | coding | downstream | 79534 | 19219364 ~ 19219434 (+) |
| ghr | ghr2 | coding | downstream | 87209 | 19227039 ~ 19249902 (+) |
| LOC110509338 | LOC106563371 | coding | downstream | 131794 | 19271624 ~ 19273362 (+) |
| LOC110509758 | LOC106563369 | coding | downstream | 140166 | 19279996 ~ 19281486 (+) |
| G2160818 | NA | non-coding | upstream | 9085 | 19130314 ~ 19130530 (+) |
| G2160816 | NA | non-coding | upstream | 13150 | 19126239 ~ 19126465 (+) |
| G2160798 | NA | non-coding | upstream | 36189 | 19103199 ~ 19103426 (+) |
| G2160796 | NA | non-coding | upstream | 41928 | 19097309 ~ 19097687 (+) |
| G2160789 | NA | non-coding | upstream | 50257 | 19089092 ~ 19089358 (+) |
| G2160827 | NA | non-coding | downstream | 4611 | 19144441 ~ 19144690 (+) |
| G2160854 | NA | non-coding | downstream | 38288 | 19178118 ~ 19178463 (+) |
| G2160856 | NA | non-coding | downstream | 42047 | 19181877 ~ 19182519 (+) |
| G2160912 | NA | non-coding | downstream | 149540 | 19289370 ~ 19295540 (+) |
| G2160962 | NA | non-coding | downstream | 218017 | 19357847 ~ 19362158 (+) |
| G2158499 | LOC106563144 | other | upstream | 1948487 | 17189344 ~ 17191128 (+) |
| G2157602 | NA | other | upstream | 2785950 | 16350717 ~ 16353665 (+) |
| LOC110509766 | LOC106566689 | other | downstream | 471059 | 19609602 ~ 19616511 (+) |
| G2161635 | LOC106563312 | other | downstream | 601984 | 19741814 ~ 19752743 (+) |
| G2161678 | NA | other | downstream | 655430 | 19795260 ~ 19797774 (+) |
| LOC110509811 | LOC106563272 | other | downstream | 2058088 | 21160126 ~ 21389662 (+) |
| G2163804 | LOC106613263 | other | downstream | 2460588 | 21600418 ~ 21601052 (+) |
