G2161251


Basic Information

Item Value
gene id G2161251
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19207914 ~ 19209314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2470718
aggaagtccaggatccagttagagagggaggtgtttagtcccagggacctcagcttattgatgagctttgagggcactatggtgttgaacgctgagctgtagtcaattaatagcattctcaaaataggtgttccttttgtcgaggtgggaaagggcagtgtggagtgcaatagagattgcatcatctgtggatctgttggggcagtatgtaaattggagtgtgtctagggtttctgaggtaatggtgttgatgtgagccatgaccagcctttcaaagcatttcatggctacagatgtgagtgctacgggtcggtagacgtttaggcaggttaccttagtgttcttgggcacagggactatggttgtctgcttaaaatatgttggtattacagactcagacagggagagattgaaaatgtcagtggagacactttccagttggtcagcgcaggCTCGCAGTACAcctcctggtaatccatctgatcctgcagccttgtgaatgttaacctgtttgaaggtcttactcacatcggctgcagagagcgtgatcacacagtcttccggaacagctggtgctctcatgcatgttagtgttatttgcctcgaagcgagcatagaagtagtttagctcatctggttggctcgtgtcactgggcagctctcagctgtgcttcccttttgtagtctgtaatggtttgcaagtcctgccacatccaacgagcatccACCTCCTATCATTCTAACCTTTTTTGTCattgttaatatatatataccattTGACCAGCTCTCTCCGCTCAAGCCGTGAACTGACTAAtttatctgcatgtccagcccgTATTTATCCTGACAATGAAGTGTTTCACAGTTTTTCGTTCCAGGGCTACAAGCAGAATAGAAAACTATTTGACATATATAGTTGCATTCATTagttttattgacaaatgtcAATGGAAAAAATAAGGTAATTCAAAGCAAAACCTGAAATGATTTTATATAAATGCTGTAAGTGCAGAAATTGTATGGTCACTGGGAAATTAATATctaactagtcagtgacaactgtgggGCGGTTGGAGTTTGACAGCAACCGTGagtttattacagtattatagacaccacgttctgggatttcctatgatcttggGACAGCGGTCGGTTGTGAGTGAATGTATTAGAGTCCTCTGTTTTTATGTGTATGCAACATGGACTGACTGGATTAAATGTGTCTGATGTGAGAATTTATTTGATCCTTTTTTAATCGAAGGTGATACCAAAGAAAAATGGTATTCTATggacagtaccttcagaaagtattcacaccccttgactttttccacattttgtgttacatcctgaaatTGAAATGGAGTGTCAGTGTCACtgatcttcacacaatacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2470718 True 1401 lncRNA 0.43 1 19207914 19209314

Neighbor

gene id symbol gene type direction distance location
LOC110509754 LOC106563372 coding downstream 54206 19152020 ~ 19153708 (-)
LOC110509752 LOC106563351 coding downstream 137565 19068416 ~ 19070349 (-)
nefma nfm coding downstream 340161 18861950 ~ 18867753 (-)
LOC110509748 LOC100194644 coding downstream 359682 18842370 ~ 18848232 (-)
LOC118945262 LOC106563169 coding downstream 365708 18834413 ~ 18842206 (-)
LOC110509755 LOC106563327 coding upstream 8029 19217343 ~ 19224878 (-)
LOC110509757 LOC106563370 coding upstream 66225 19275539 ~ 19277044 (-)
LOC110509759 LOC106563326 coding upstream 148479 19307783 ~ 19409443 (-)
LOC110509760 LOC106563325 coding upstream 293217 19502531 ~ 19508829 (-)
LOC110509339 NA coding upstream 305491 19514805 ~ 19518900 (-)
G2161247 NA non-coding downstream 3457 19184443 ~ 19204457 (-)
G2161287 NA non-coding downstream 41525 19166074 ~ 19166389 (-)
G2161286 NA non-coding downstream 43189 19164160 ~ 19164725 (-)
G2161282 NA non-coding downstream 47779 19158350 ~ 19160135 (-)
G2161280 NA non-coding downstream 51414 19156037 ~ 19156500 (-)
G2161428 NA non-coding upstream 228543 19437857 ~ 19438254 (-)
G2161430 NA non-coding upstream 229930 19439244 ~ 19439460 (-)
G2161442 NA non-coding upstream 236876 19446190 ~ 19446736 (-)
G2161444 NA non-coding upstream 238024 19447338 ~ 19447563 (-)
G2158111 akna other downstream 2561317 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 2599908 16607625 ~ 16608006 (-)
G2157743 NA other downstream 2784493 16421677 ~ 16423421 (-)
G2157715 NA other downstream 2821869 16381190 ~ 16386045 (-)
G2155120 NA other downstream 4976908 14227820 ~ 14231006 (-)
G2162005 NA other upstream 775231 19984545 ~ 19984779 (-)
G2162127 NA other upstream 873831 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 878916 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 1099875 20309189 ~ 20309802 (-)

Expression


Co-expression Network