G2161442


Basic Information

Item Value
gene id G2161442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19446190 ~ 19446736 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2470997
ggcctggcttgcagtcagcattccaattaatctcaaaggtgtttgatggggttgaggtcagggctctgtgaaggtcagtcaagttcttccacaccgacatAGACAAACTACttctgtatagacctcgctttgtgcacgggggcattgtcatgctgaaacaggaaatggccttccccaaacggttaccacaaggttggaagcacagaatcagctagaatgtcattgtatgctgtagcgttaagatttcctttttctggaactaaggggcctagcccgaaccatgaaaaacagccccagaccattattcctcatccaccaaactttacagttggcactatacattggggcaggtagcgttctcctggaatttgtcaaatccagatttgtccagcagatggtgaagtgtgattcatcactacagagaacgcATTTTCACGTGTGCCAGATCCATAAAGACCCGTAATCATCAGAAGGATAATGGAATAACAAAACAATGACTGGTCAGGGCAGAGTGATAATTGCATCTTACTTTTGTAatggagtcagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2470997 True 547 lncRNA 0.45 1 19446190 19446736

Neighbor

gene id symbol gene type direction distance location
LOC110509759 LOC106563326 coding downstream 36747 19307783 ~ 19409443 (-)
LOC110509757 LOC106563370 coding downstream 169146 19275539 ~ 19277044 (-)
LOC110509755 LOC106563327 coding downstream 221312 19217343 ~ 19224878 (-)
LOC110509754 LOC106563372 coding downstream 292482 19152020 ~ 19153708 (-)
LOC110509752 LOC106563351 coding downstream 375841 19068416 ~ 19070349 (-)
LOC110509760 LOC106563325 coding upstream 55795 19502531 ~ 19508829 (-)
LOC110509339 NA coding upstream 68069 19514805 ~ 19518900 (-)
LOC110509765 LOC106563324 coding upstream 153126 19599862 ~ 19611225 (-)
pmchl LOC106563365 coding upstream 269327 19716063 ~ 19716692 (-)
LOC100136307 LOC106563312 coding upstream 291849 19738585 ~ 19785892 (-)
G2161430 NA non-coding downstream 6730 19439244 ~ 19439460 (-)
G2161428 NA non-coding downstream 7936 19437857 ~ 19438254 (-)
G2161251 NA non-coding downstream 236876 19207914 ~ 19209314 (-)
G2161247 NA non-coding downstream 241733 19184443 ~ 19204457 (-)
G2161444 NA non-coding upstream 602 19447338 ~ 19447563 (-)
G2161750 NA non-coding upstream 39428 19486164 ~ 19486460 (-)
G2161780 NA non-coding upstream 86892 19533628 ~ 19534656 (-)
G2161828 NA non-coding upstream 169906 19616642 ~ 19617284 (-)
G2161830 NA non-coding upstream 174250 19620986 ~ 19622577 (-)
G2158111 akna other downstream 2799593 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 2838184 16607625 ~ 16608006 (-)
G2157743 NA other downstream 3022769 16421677 ~ 16423421 (-)
G2157715 NA other downstream 3060145 16381190 ~ 16386045 (-)
G2162005 NA other upstream 537809 19984545 ~ 19984779 (-)
G2162127 NA other upstream 636409 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 641494 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 862453 20309189 ~ 20309802 (-)
G2162422 LOC106563345 other upstream 883012 20329748 ~ 20330138 (-)

Expression


Co-expression Network