Gene
RNA
| Item | Value |
|---|---|
| gene id | G2161458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 19458157 ~ 19458362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2471013 | True | 206 | lncRNA | 0.32 | 1 | 19458157 | 19458362 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509758 | LOC106563369 | coding | upstream | 176671 | 19279996 ~ 19281486 (+) |
| LOC110509338 | LOC106563371 | coding | upstream | 184795 | 19271624 ~ 19273362 (+) |
| ghr | ghr2 | coding | upstream | 208255 | 19227039 ~ 19249902 (+) |
| trnac-gca-162 | NA | coding | upstream | 238723 | 19219364 ~ 19219434 (+) |
| c6 | c6 | coding | upstream | 253586 | 19170068 ~ 19204571 (+) |
| LOC110509761 | LOC106563368 | coding | downstream | 73830 | 19532192 ~ 19534613 (+) |
| LOC110509762 | LOC106566653 | coding | downstream | 77301 | 19535663 ~ 19560763 (+) |
| tjp2a | LOC106563322 | coding | downstream | 105159 | 19563521 ~ 19599545 (+) |
| LOC110509766 | LOC106566689 | coding | downstream | 151240 | 19609602 ~ 19616511 (+) |
| LOC110509769 | smc5 | coding | downstream | 161284 | 19619646 ~ 19626660 (+) |
| G2161445 | NA | non-coding | upstream | 9972 | 19447984 ~ 19448185 (+) |
| G2161436 | NA | non-coding | upstream | 15343 | 19442579 ~ 19442814 (+) |
| G2161431 | NA | non-coding | upstream | 18229 | 19439648 ~ 19439928 (+) |
| G2161424 | NA | non-coding | upstream | 21854 | 19436100 ~ 19436303 (+) |
| G2160962 | NA | non-coding | upstream | 95999 | 19357847 ~ 19362158 (+) |
| G2161468 | NA | non-coding | downstream | 5912 | 19464274 ~ 19464632 (+) |
| G2161492 | NA | non-coding | downstream | 26736 | 19485098 ~ 19485328 (+) |
| G2161568 | NA | non-coding | downstream | 158360 | 19616722 ~ 19618416 (+) |
| LOC118936421 | smc5 | non-coding | downstream | 170205 | 19628508 ~ 19631851 (+) |
| G2161585 | NA | non-coding | downstream | 203166 | 19661528 ~ 19661731 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 320589 | 19136428 ~ 19138160 (+) |
| LOC118945267 | NA | other | upstream | 389373 | 19066137 ~ 19068784 (+) |
| LOC110509751 | LOC106563328 | other | upstream | 392385 | 18962089 ~ 19065920 (+) |
| G2158499 | LOC106563144 | other | upstream | 2267029 | 17189344 ~ 17191128 (+) |
| G2157602 | NA | other | upstream | 3104492 | 16350717 ~ 16353665 (+) |
| G2161635 | LOC106563312 | other | downstream | 283452 | 19741814 ~ 19752743 (+) |
| G2161678 | NA | other | downstream | 336898 | 19795260 ~ 19797774 (+) |
| LOC110509811 | LOC106563272 | other | downstream | 1739556 | 21160126 ~ 21389662 (+) |
| G2163804 | LOC106613263 | other | downstream | 2142056 | 21600418 ~ 21601052 (+) |
