G2161492


Basic Information

Item Value
gene id G2161492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19485098 ~ 19485328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2471047
attggataccacgaaattggggagaaaaaagtaAAATTCAAACACCAAAaaaaaatagatggcttcatgaggaaggaaaatgatgtcgatatattgaagcaacaactcaagacatcagtcaggaagttaaagcttggtcgcaaataggtcttccaaatggacaatgaccccaagcatatttccaaagttgtgtcaaaatggcttaaggacaacaaagtcaaggtattggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2471047 True 231 lncRNA 0.37 1 19485098 19485328

Neighbor

gene id symbol gene type direction distance location
LOC110509758 LOC106563369 coding upstream 203612 19279996 ~ 19281486 (+)
LOC110509338 LOC106563371 coding upstream 211736 19271624 ~ 19273362 (+)
ghr ghr2 coding upstream 235196 19227039 ~ 19249902 (+)
trnac-gca-162 NA coding upstream 265664 19219364 ~ 19219434 (+)
c6 c6 coding upstream 280527 19170068 ~ 19204571 (+)
LOC110509761 LOC106563368 coding downstream 46864 19532192 ~ 19534613 (+)
LOC110509762 LOC106566653 coding downstream 50335 19535663 ~ 19560763 (+)
tjp2a LOC106563322 coding downstream 78193 19563521 ~ 19599545 (+)
LOC110509766 LOC106566689 coding downstream 124274 19609602 ~ 19616511 (+)
LOC110509769 smc5 coding downstream 134318 19619646 ~ 19626660 (+)
G2161468 NA non-coding upstream 20466 19464274 ~ 19464632 (+)
G2161458 NA non-coding upstream 26736 19458157 ~ 19458362 (+)
G2161445 NA non-coding upstream 36913 19447984 ~ 19448185 (+)
G2161436 NA non-coding upstream 42284 19442579 ~ 19442814 (+)
G2161431 NA non-coding upstream 45170 19439648 ~ 19439928 (+)
G2161568 NA non-coding downstream 131394 19616722 ~ 19618416 (+)
LOC118936421 smc5 non-coding downstream 143239 19628508 ~ 19631851 (+)
G2161585 NA non-coding downstream 176200 19661528 ~ 19661731 (+)
G2161600 NA non-coding downstream 202173 19687501 ~ 19687838 (+)
G2161601 NA non-coding downstream 203545 19688873 ~ 19689146 (+)
LOC110509753 LOC106563373 other upstream 347530 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 416314 19066137 ~ 19068784 (+)
LOC110509751 LOC106563328 other upstream 419326 18962089 ~ 19065920 (+)
G2158499 LOC106563144 other upstream 2293970 17189344 ~ 17191128 (+)
G2157602 NA other upstream 3131433 16350717 ~ 16353665 (+)
G2161635 LOC106563312 other downstream 256486 19741814 ~ 19752743 (+)
G2161678 NA other downstream 309932 19795260 ~ 19797774 (+)
LOC110509811 LOC106563272 other downstream 1712590 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 2115090 21600418 ~ 21601052 (+)

Expression


Co-expression Network