Gene
RNA
| Item | Value |
|---|---|
| gene id | G2161585 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 19661528 ~ 19661731 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2471162 | True | 204 | lncRNA | 0.34 | 1 | 19661528 | 19661731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509340 | LOC106563366 | coding | upstream | 1527 | 19651752 ~ 19660001 (+) |
| LOC110509767 | LOC105015049 | coding | upstream | 16560 | 19630925 ~ 19644968 (+) |
| LOC118936421 | smc5 | coding | upstream | 29677 | 19628508 ~ 19631851 (+) |
| LOC110509769 | smc5 | coding | upstream | 34868 | 19619646 ~ 19626660 (+) |
| LOC110509766 | LOC106566689 | coding | upstream | 45633 | 19609602 ~ 19616511 (+) |
| slc30a5 | slc30a5 | coding | downstream | 4452 | 19666183 ~ 19672307 (+) |
| LOC100136690 | LOC100136690 | coding | downstream | 11435 | 19673166 ~ 19676413 (+) |
| LOC110509364 | LOC106563314 | coding | downstream | 143631 | 19805362 ~ 19806854 (+) |
| LOC110509774 | LOC106563307 | coding | downstream | 177935 | 19839666 ~ 19844815 (+) |
| LOC110509777 | NA | coding | downstream | 185292 | 19847023 ~ 19849150 (+) |
| G2161568 | NA | non-coding | upstream | 43112 | 19616722 ~ 19618416 (+) |
| G2161492 | NA | non-coding | upstream | 176200 | 19485098 ~ 19485328 (+) |
| G2161468 | NA | non-coding | upstream | 196896 | 19464274 ~ 19464632 (+) |
| G2161458 | NA | non-coding | upstream | 203166 | 19458157 ~ 19458362 (+) |
| G2161600 | NA | non-coding | downstream | 25770 | 19687501 ~ 19687838 (+) |
| G2161601 | NA | non-coding | downstream | 27142 | 19688873 ~ 19689146 (+) |
| G2161656 | NA | non-coding | downstream | 127168 | 19788899 ~ 19789132 (+) |
| G2161679 | NA | non-coding | downstream | 136359 | 19798090 ~ 19799509 (+) |
| G2161680 | NA | non-coding | downstream | 137914 | 19799645 ~ 19800262 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 523960 | 19136428 ~ 19138160 (+) |
| LOC118945267 | NA | other | upstream | 592744 | 19066137 ~ 19068784 (+) |
| LOC110509751 | LOC106563328 | other | upstream | 595756 | 18962089 ~ 19065920 (+) |
| G2158499 | LOC106563144 | other | upstream | 2470400 | 17189344 ~ 17191128 (+) |
| G2161635 | LOC106563312 | other | downstream | 80083 | 19741814 ~ 19752743 (+) |
| G2161678 | NA | other | downstream | 133529 | 19795260 ~ 19797774 (+) |
| LOC110509811 | LOC106563272 | other | downstream | 1536187 | 21160126 ~ 21389662 (+) |
| G2163804 | LOC106613263 | other | downstream | 1938687 | 21600418 ~ 21601052 (+) |
| G2165628 | LOC106563266 | other | downstream | 3175340 | 22837071 ~ 22841481 (+) |
