G2161678


Basic Information

Item Value
gene id G2161678
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19795260 ~ 19797774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2471264
ggaaggagtgtcttcatttggaatcgaatttaggccgctcaaatcagctctgacttcagtcagtgttctagaaggaattggggctggggtgcaatgtgtaaggcggtgtcaaggtgtgcctgatttacctttgacctggactgagtgtgaagtaacctccttcacttcgtacggtccagtccacctgggttccagccactttctcttgtggactgtaaccctcaccccgtcaccaacctttaccttcagtagtgtcgtgtcccccggcagctccccctcctggaccttgtgaacctgggtagagagtgctgcagagagaaccgtcagtttttcacataattagacattacaatttgttgtacatcaagggcgggcatatgacctccctcccttggtggaccatgcatgactctaccagtcattatcccatgaggcacatactttagctatcttagcttttgcttttggtttgacgttccaccagattttgggattggggcctgtacacagatccaaatctgtgggttatgccaaatctttcttccacctgtctcaggtgtttgttaaatgtgagccatttgtcaaatttgatttgtcttgggatgccatacctgggtattagtttggtttgtagccacttaaaagactgacctagcatcctccccttttgttagtattgcctctacccatttggagaacctatctactatgactaggagatagagtttgcctttagataaatttttggggcccatgtcggtgtagtctatcctaatatcctgaaaacatgcattaggtattacgtatgagcccattggtgtttgatatggtttctttgggttgtgtctgtcacaaccattgcattcgtcacaaaataaataatcgtcataaaataagtcagtcatattttttatgtgagggtgccaccagatgtgcagggctttttggagggtctttagtttgccttcgtgtgtggggccatgtgcttctcataaaagttctgggtccatcagtgtggcctgcttcatgggcatgggctgagtctgtatagatattcagtctttccttttcctctgatgaggacctgcgtcaatccgatgatttcagctaatttggccgatgctggttgagggatgatggctgattgaagggtgacatcacgaggtgagctgttttttcaatagcttttgctactgcagcaacgtatctggagcatgttgactgtcctaccacaatgtggtcaagtttgaagagtagtacatcaagacccttctctccccctcttgtttctggaataggacggatgaggtgaatccttccctttcagaaacatccaaatggaacttgttcttgtagtcaggtgcagtcagagctgctgccgctgatagatctgttttcaggaatgctatggctgttgatgcttcagccgtccaggccaggggtgcatggaggttccttgatcgtaggatgaccggtgctgccaccccctctgggccacacccaatggtacaacacctgataggtggggtcaggtgcatcatgtcttcgtcccagtctgcagtgtagaggcagtcatcagtttctgttgcattgagtgtgcaatggatctcagcttggggagtcttatatgggtgcagagtgtagatttgagctttcagttggttgaacttaaactggatgtgaggggtggcaggccctgtgggtaggcattttagccagtacacttcttgggcttcagacagtgtggtcatcggcaggagtggcatcctcatcattcttactgggtgatcaggtgttgaagtgggagggttggttgtaatcttgctgctcctgttgcatgtggctagattctgggtggttgtatgctggctgttgctgatgcatgggtgtgggtcctggttgctgatgttgcagaggtgggtttcccccacttcctcttgctctccattgctgttgctgcGGGGAGAGTGGTTTCATGCAATCTCTGGCAAAATGACCGGTAATTCCGCAGTTAAAACACTGGTAATTTCCCCCTCTGTGTTGTCCAGTGTAGGGACCCCGTCGAGCCCATACTGGGTGTTGTTGTTGCAGGATATACTGCTGTGGGTGAGGGTATTGGGGTGGTGGggctgcctgctgttggatcatctgagagacagtctgtgccacgatttgggagatgtctgttttggttcccggctccttcgtttcttccgccaccatctgtttcttaggtttttctccttgttgtgcttccttcaattggagtttcaggagttgtacctggagggactgcacctggctctcagcaccccctctttccttgttgtgctgggtcacatggtggtgcacatgcgtattgaattgggtcagaggaagtgcaatcaaccctaccgttcctctgagtttggttttaacatctccaggacacccgttgaccaccatttccttccacatgctgagtgtggtatcagtgtgatcgaatggttcttcgtggaccgatctccatgtggtc

Function

NR:

description
uncharacterized protein LOC110512511

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2471264 True 2515 TUCP 0.49 1 19795260 19797774

Neighbor

gene id symbol gene type direction distance location
LOC100136690 LOC100136690 coding upstream 118847 19673166 ~ 19676413 (+)
slc30a5 slc30a5 coding upstream 122953 19666183 ~ 19672307 (+)
LOC110509340 LOC106563366 coding upstream 135259 19651752 ~ 19660001 (+)
LOC110509767 LOC105015049 coding upstream 150292 19630925 ~ 19644968 (+)
LOC118936421 smc5 coding upstream 163409 19628508 ~ 19631851 (+)
LOC110509364 LOC106563314 coding downstream 7588 19805362 ~ 19806854 (+)
LOC110509774 LOC106563307 coding downstream 41892 19839666 ~ 19844815 (+)
LOC110509777 NA coding downstream 49249 19847023 ~ 19849150 (+)
fbxw5 LOC106563306 coding downstream 62619 19860393 ~ 19873346 (+)
LOC118936353 NA coding downstream 107010 19904784 ~ 19908478 (+)
G2161656 NA non-coding upstream 6128 19788899 ~ 19789132 (+)
G2161601 NA non-coding upstream 106114 19688873 ~ 19689146 (+)
G2161600 NA non-coding upstream 107422 19687501 ~ 19687838 (+)
G2161585 NA non-coding upstream 133529 19661528 ~ 19661731 (+)
G2161679 NA non-coding downstream 316 19798090 ~ 19799509 (+)
G2161680 NA non-coding downstream 1871 19799645 ~ 19800262 (+)
G2161705 NA non-coding downstream 59836 19857610 ~ 19857903 (+)
G2161667 NA non-coding downstream 75900 19873674 ~ 19874296 (+)
G2161635 LOC106563312 other upstream 42517 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 178749 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 657692 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 726476 19066137 ~ 19068784 (+)
LOC110509751 LOC106563328 other upstream 729488 18962089 ~ 19065920 (+)
LOC110509811 LOC106563272 other downstream 1400144 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1802644 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 3039297 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 3328006 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 3717848 23468400 ~ 23534217 (+)

Expression


Co-expression Network