G2161731


Basic Information

Item Value
gene id G2161731
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19941009 ~ 19941357 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2471327
CTTTTAGATTAACTAACTTCttagtaatgactcgggacgtcgggtttgatacgaaagcttattttagtaagaatacttgtttacgttacatttaacaacaattgttttggtacagagcaatgcaggtaagatgctgtcGGAATGTCAGCCACAATCACTCGCACCTGCACATAATTGGCGCGTTATCACTCATTCctctcgcaaggcattctgggacttgcagtcaaaaagcgtaattcaacacaacccaatacaattacatatgcaaataaatctaaagaaatatctttagatacagctcaaagaataaacttaaacattaactctgtaacacattaaagttacaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2471327 True 349 lncRNA 0.36 1 19941009 19941357

Neighbor

gene id symbol gene type direction distance location
LOC110509779 coq4 coding upstream 12450 19921602 ~ 19928559 (+)
LOC118936353 NA coding upstream 32531 19904784 ~ 19908478 (+)
fbxw5 LOC106563306 coding upstream 67663 19860393 ~ 19873346 (+)
LOC110509777 NA coding upstream 91859 19847023 ~ 19849150 (+)
LOC110509774 LOC106563307 coding upstream 96194 19839666 ~ 19844815 (+)
zmynd19 LOC106563301 coding downstream 15548 19956905 ~ 19969792 (+)
LOC110509781 LOC106563300 coding downstream 28500 19969857 ~ 19977843 (+)
LOC110509783 LOC106563299 coding downstream 54007 19995364 ~ 20011389 (+)
LOC110509784 LOC106563296 coding downstream 84556 20025913 ~ 20042438 (+)
wbp1 LOC106563291 coding downstream 178658 20120015 ~ 20131381 (+)
G2161720 NA non-coding upstream 5680 19934995 ~ 19935329 (+)
G2161719 NA non-coding upstream 6239 19934441 ~ 19934770 (+)
G2161662 NA non-coding upstream 12541 19905895 ~ 19928468 (+)
G2161661 NA non-coding upstream 60703 19879903 ~ 19880306 (+)
G2161667 NA non-coding upstream 66713 19873674 ~ 19874296 (+)
G2161734 NA non-coding downstream 1863 19943220 ~ 19943427 (+)
G2161736 NA non-coding downstream 3715 19945072 ~ 19945283 (+)
G2162020 NA non-coding downstream 70574 20011931 ~ 20012631 (+)
G2162034 NA non-coding downstream 79368 20020725 ~ 20020930 (+)
G2162035 NA non-coding downstream 80177 20021534 ~ 20021738 (+)
G2161678 NA other upstream 143235 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 188266 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 324498 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 803441 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 872225 19066137 ~ 19068784 (+)
LOC110509811 LOC106563272 other downstream 1256561 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1659061 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 2895714 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 3184423 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 3574265 23468400 ~ 23534217 (+)

Expression


Co-expression Network