Gene
RNA
| Item | Value |
|---|---|
| gene id | G2161992 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 19973873 ~ 19974155 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110509781 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2471619 | True | 283 | lncRNA | 0.46 | 1 | 19973873 | 19974155 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509780 | LOC106563302 | coding | downstream | 23249 | 19946567 ~ 19950624 (-) |
| traf2 | LOC106563303 | coding | downstream | 68000 | 19882762 ~ 19905873 (-) |
| LOC110509775 | LOC106563308 | coding | downstream | 133189 | 19837235 ~ 19840684 (-) |
| LOC110509773 | LOC106563311 | coding | downstream | 138604 | 19807260 ~ 19835269 (-) |
| LOC110509772 | LOC106563313 | coding | downstream | 180979 | 19780056 ~ 19792894 (-) |
| LOC110509785 | LOC106563298 | coding | upstream | 48973 | 20023128 ~ 20025908 (-) |
| LOC110509787 | LOC106563295 | coding | upstream | 76640 | 20050795 ~ 20063783 (-) |
| LOC110509788 | LOC106563294 | coding | upstream | 114070 | 20088225 ~ 20093695 (-) |
| lman2la | lman2l | coding | upstream | 164801 | 20138956 ~ 20143762 (-) |
| LOC110509794 | ddx54 | coding | upstream | 787506 | 20761661 ~ 20772043 (-) |
| G2161978 | NA | non-coding | downstream | 17656 | 19955907 ~ 19956217 (-) |
| G2161975 | NA | non-coding | downstream | 21249 | 19952311 ~ 19952624 (-) |
| G2161972 | NA | non-coding | downstream | 28793 | 19944805 ~ 19945080 (-) |
| G2161970 | NA | non-coding | downstream | 31930 | 19941606 ~ 19941943 (-) |
| G2161969 | NA | non-coding | downstream | 33487 | 19940140 ~ 19940386 (-) |
| G2162004 | NA | non-coding | upstream | 10069 | 19984224 ~ 19984509 (-) |
| G2162013 | NA | non-coding | upstream | 15324 | 19989479 ~ 19989868 (-) |
| G2162014 | NA | non-coding | upstream | 15744 | 19989899 ~ 19990316 (-) |
| G2162074 | NA | non-coding | upstream | 18302 | 19992457 ~ 19992675 (-) |
| G2162077 | NA | non-coding | upstream | 19853 | 19994008 ~ 19994251 (-) |
| LOC110509757 | LOC106563370 | other | downstream | 696867 | 19275539 ~ 19277044 (-) |
| G2158111 | akna | other | downstream | 3327276 | 16643681 ~ 16646597 (-) |
| G2158088 | LOC100136012 | other | downstream | 3365867 | 16607625 ~ 16608006 (-) |
| G2157743 | NA | other | downstream | 3550452 | 16421677 ~ 16423421 (-) |
| G2157715 | NA | other | downstream | 3587828 | 16381190 ~ 16386045 (-) |
| G2162005 | NA | other | upstream | 10390 | 19984545 ~ 19984779 (-) |
| G2162127 | NA | other | upstream | 108990 | 20083145 ~ 20083618 (-) |
| G2162405 | LOC106563289 | other | upstream | 335034 | 20309189 ~ 20309802 (-) |
| G2162422 | LOC106563345 | other | upstream | 355593 | 20329748 ~ 20330138 (-) |
