Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162074 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 19992457 ~ 19992675 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2471722 | True | 219 | lncRNA | 0.36 | 1 | 19992457 | 19992675 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509780 | LOC106563302 | coding | downstream | 41833 | 19946567 ~ 19950624 (-) |
| traf2 | LOC106563303 | coding | downstream | 86584 | 19882762 ~ 19905873 (-) |
| LOC110509775 | LOC106563308 | coding | downstream | 151773 | 19837235 ~ 19840684 (-) |
| LOC110509773 | LOC106563311 | coding | downstream | 157188 | 19807260 ~ 19835269 (-) |
| LOC110509772 | LOC106563313 | coding | downstream | 199563 | 19780056 ~ 19792894 (-) |
| LOC110509785 | LOC106563298 | coding | upstream | 30453 | 20023128 ~ 20025908 (-) |
| LOC110509787 | LOC106563295 | coding | upstream | 58120 | 20050795 ~ 20063783 (-) |
| LOC110509788 | LOC106563294 | coding | upstream | 95550 | 20088225 ~ 20093695 (-) |
| lman2la | lman2l | coding | upstream | 146281 | 20138956 ~ 20143762 (-) |
| LOC110509794 | ddx54 | coding | upstream | 768986 | 20761661 ~ 20772043 (-) |
| G2162014 | NA | non-coding | downstream | 2141 | 19989899 ~ 19990316 (-) |
| G2162013 | NA | non-coding | downstream | 2589 | 19989479 ~ 19989868 (-) |
| G2162004 | NA | non-coding | downstream | 7948 | 19984224 ~ 19984509 (-) |
| G2161992 | NA | non-coding | downstream | 18302 | 19973873 ~ 19974155 (-) |
| G2161978 | NA | non-coding | downstream | 36240 | 19955907 ~ 19956217 (-) |
| G2162077 | NA | non-coding | upstream | 1333 | 19994008 ~ 19994251 (-) |
| G2162087 | NA | non-coding | upstream | 15799 | 20008474 ~ 20011382 (-) |
| G2162091 | NA | non-coding | upstream | 22819 | 20015494 ~ 20015723 (-) |
| G2162095 | NA | non-coding | upstream | 28963 | 20021638 ~ 20021941 (-) |
| G2162097 | NA | non-coding | upstream | 30027 | 20022702 ~ 20023034 (-) |
| G2162005 | NA | other | downstream | 7678 | 19984545 ~ 19984779 (-) |
| LOC110509757 | LOC106563370 | other | downstream | 715451 | 19275539 ~ 19277044 (-) |
| G2158111 | akna | other | downstream | 3345860 | 16643681 ~ 16646597 (-) |
| G2158088 | LOC100136012 | other | downstream | 3384451 | 16607625 ~ 16608006 (-) |
| G2157743 | NA | other | downstream | 3569036 | 16421677 ~ 16423421 (-) |
| G2162127 | NA | other | upstream | 90470 | 20083145 ~ 20083618 (-) |
| G2162405 | LOC106563289 | other | upstream | 316514 | 20309189 ~ 20309802 (-) |
| G2162422 | LOC106563345 | other | upstream | 337073 | 20329748 ~ 20330138 (-) |
| surf4 | LOC106563281 | other | upstream | 977657 | 20970332 ~ 20978032 (-) |
