G2162097



Basic Information


Item Value
gene id G2162097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 20022702 ~ 20023034 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2471749
GCAACACGAAATCCGCAATGCTCTCTCTATTGGCGATTTAGCAAACGTAGCTACACAGTAATACCGAAGACAATATCAGCATGTAAAGTGGGTAGTTAGCTGTAAAATCGCCTGAACAAATTGtaggagtctacaatctcaccatgttcaacctgcagattGATGTGGAGTCTAGCATTCGCaactgcatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2471749 True 333 lncRNA 0.41 1 20022702 20023034

Neighbor


gene id symbol gene type direction distance location
LOC110509780 LOC106563302 coding downstream 72078 19946567 ~ 19950624 (-)
traf2 LOC106563303 coding downstream 116829 19882762 ~ 19905873 (-)
LOC110509775 LOC106563308 coding downstream 182018 19837235 ~ 19840684 (-)
LOC110509773 LOC106563311 coding downstream 187433 19807260 ~ 19835269 (-)
LOC110509772 LOC106563313 coding downstream 229808 19780056 ~ 19792894 (-)
LOC110509785 LOC106563298 coding upstream 94 20023128 ~ 20025908 (-)
LOC110509787 LOC106563295 coding upstream 27761 20050795 ~ 20063783 (-)
LOC110509788 LOC106563294 coding upstream 65191 20088225 ~ 20093695 (-)
lman2la lman2l coding upstream 115922 20138956 ~ 20143762 (-)
LOC110509794 ddx54 coding upstream 738627 20761661 ~ 20772043 (-)
G2162095 NA non-coding downstream 761 20021638 ~ 20021941 (-)
G2162091 NA non-coding downstream 6979 20015494 ~ 20015723 (-)
G2162087 NA non-coding downstream 11320 20008474 ~ 20011382 (-)
G2162077 NA non-coding downstream 28451 19994008 ~ 19994251 (-)
G2162074 NA non-coding downstream 30027 19992457 ~ 19992675 (-)
G2162098 NA non-coding upstream 3967 20027001 ~ 20027292 (-)
G2162100 LOC106563296 non-coding upstream 6059 20029093 ~ 20030960 (-)
G2162126 NA non-coding upstream 59728 20082762 ~ 20083004 (-)
G2162136 NA non-coding upstream 76511 20099545 ~ 20099749 (-)
G2162137 NA non-coding upstream 77109 20100143 ~ 20100359 (-)
G2162005 NA other downstream 37923 19984545 ~ 19984779 (-)
LOC110509757 LOC106563370 other downstream 745696 19275539 ~ 19277044 (-)
G2158111 akna other downstream 3376105 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 3414696 16607625 ~ 16608006 (-)
G2157743 NA other downstream 3599281 16421677 ~ 16423421 (-)
G2162127 NA other upstream 60111 20083145 ~ 20083618 (-)
G2162405 LOC106563289 other upstream 286155 20309189 ~ 20309802 (-)
G2162422 LOC106563345 other upstream 306714 20329748 ~ 20330138 (-)
surf4 LOC106563281 other upstream 947298 20970332 ~ 20978032 (-)

Expression



Co-expression Network