Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162160 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20116294 ~ 20117019 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2471812 | True | 726 | lncRNA | 0.37 | 1 | 20116294 | 20117019 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509788 | LOC106563294 | coding | downstream | 22599 | 20088225 ~ 20093695 (-) |
| LOC110509787 | LOC106563295 | coding | downstream | 52511 | 20050795 ~ 20063783 (-) |
| LOC110509785 | LOC106563298 | coding | downstream | 90386 | 20023128 ~ 20025908 (-) |
| LOC110509780 | LOC106563302 | coding | downstream | 165670 | 19946567 ~ 19950624 (-) |
| traf2 | LOC106563303 | coding | downstream | 210421 | 19882762 ~ 19905873 (-) |
| lman2la | lman2l | coding | upstream | 21937 | 20138956 ~ 20143762 (-) |
| LOC110509794 | ddx54 | coding | upstream | 644642 | 20761661 ~ 20772043 (-) |
| LOC110509795 | LOC106563284 | coding | upstream | 694717 | 20811736 ~ 20869832 (-) |
| LOC110509797 | exos2 | coding | upstream | 754453 | 20871472 ~ 20878088 (-) |
| LOC110509798 | LOC106563283 | coding | upstream | 763395 | 20880412 ~ 20885181 (-) |
| G2162150 | NA | non-coding | downstream | 8008 | 20108034 ~ 20108286 (-) |
| G2162137 | NA | non-coding | downstream | 15935 | 20100143 ~ 20100359 (-) |
| G2162136 | NA | non-coding | downstream | 16545 | 20099545 ~ 20099749 (-) |
| G2162126 | NA | non-coding | downstream | 33290 | 20082762 ~ 20083004 (-) |
| G2162100 | LOC106563296 | non-coding | downstream | 85334 | 20029093 ~ 20030960 (-) |
| G2162186 | NA | non-coding | upstream | 9188 | 20126207 ~ 20126461 (-) |
| G2162182 | NA | non-coding | upstream | 19796 | 20136815 ~ 20137734 (-) |
| G2162197 | NA | non-coding | upstream | 35594 | 20152613 ~ 20152830 (-) |
| G2162316 | NA | non-coding | upstream | 73227 | 20190246 ~ 20190722 (-) |
| G2162366 | NA | non-coding | upstream | 133424 | 20250443 ~ 20250664 (-) |
| G2162127 | NA | other | downstream | 32676 | 20083145 ~ 20083618 (-) |
| G2162005 | NA | other | downstream | 131515 | 19984545 ~ 19984779 (-) |
| LOC110509757 | LOC106563370 | other | downstream | 839288 | 19275539 ~ 19277044 (-) |
| G2158111 | akna | other | downstream | 3469697 | 16643681 ~ 16646597 (-) |
| G2162405 | LOC106563289 | other | upstream | 192170 | 20309189 ~ 20309802 (-) |
| G2162422 | LOC106563345 | other | upstream | 212729 | 20329748 ~ 20330138 (-) |
| surf4 | LOC106563281 | other | upstream | 853313 | 20970332 ~ 20978032 (-) |
| rabepk | rabepk | other | upstream | 1028130 | 21138218 ~ 21146494 (-) |
| G2163913 | NA | other | upstream | 1479532 | 21596551 ~ 21597495 (-) |
