Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162390 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20285868 ~ 20286127 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472070 | True | 260 | lncRNA | 0.52 | 1 | 20285868 | 20286127 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lman2la | lman2l | coding | downstream | 142106 | 20138956 ~ 20143762 (-) |
| LOC110509788 | LOC106563294 | coding | downstream | 192173 | 20088225 ~ 20093695 (-) |
| LOC110509787 | LOC106563295 | coding | downstream | 222085 | 20050795 ~ 20063783 (-) |
| LOC110509785 | LOC106563298 | coding | downstream | 259960 | 20023128 ~ 20025908 (-) |
| LOC110509780 | LOC106563302 | coding | downstream | 335244 | 19946567 ~ 19950624 (-) |
| LOC110509794 | ddx54 | coding | upstream | 475534 | 20761661 ~ 20772043 (-) |
| LOC110509795 | LOC106563284 | coding | upstream | 525609 | 20811736 ~ 20869832 (-) |
| LOC110509797 | exos2 | coding | upstream | 585345 | 20871472 ~ 20878088 (-) |
| LOC110509798 | LOC106563283 | coding | upstream | 594287 | 20880412 ~ 20885181 (-) |
| LOC110509799 | fubp3 | coding | upstream | 605683 | 20891810 ~ 20921213 (-) |
| G2162386 | NA | non-coding | downstream | 8786 | 20276720 ~ 20277082 (-) |
| G2162376 | NA | non-coding | downstream | 21804 | 20263788 ~ 20264064 (-) |
| G2162375 | NA | non-coding | downstream | 22164 | 20263416 ~ 20263704 (-) |
| G2162374 | NA | non-coding | downstream | 23477 | 20262100 ~ 20262391 (-) |
| G2162372 | NA | non-coding | downstream | 28348 | 20257313 ~ 20257520 (-) |
| G2162401 | NA | non-coding | upstream | 17572 | 20303699 ~ 20304128 (-) |
| G2162418 | NA | non-coding | upstream | 38724 | 20324851 ~ 20325077 (-) |
| G2162423 | NA | non-coding | upstream | 48614 | 20334741 ~ 20335200 (-) |
| G2162429 | NA | non-coding | upstream | 73255 | 20359382 ~ 20359606 (-) |
| G2162461 | NA | non-coding | upstream | 98877 | 20385004 ~ 20385213 (-) |
| G2162127 | NA | other | downstream | 202250 | 20083145 ~ 20083618 (-) |
| G2162005 | NA | other | downstream | 301089 | 19984545 ~ 19984779 (-) |
| LOC110509757 | LOC106563370 | other | downstream | 1008862 | 19275539 ~ 19277044 (-) |
| G2158111 | akna | other | downstream | 3639271 | 16643681 ~ 16646597 (-) |
| G2162405 | LOC106563289 | other | upstream | 23062 | 20309189 ~ 20309802 (-) |
| G2162422 | LOC106563345 | other | upstream | 43621 | 20329748 ~ 20330138 (-) |
| surf4 | LOC106563281 | other | upstream | 684205 | 20970332 ~ 20978032 (-) |
| rabepk | rabepk | other | upstream | 859022 | 21138218 ~ 21146494 (-) |
| G2163913 | NA | other | upstream | 1310424 | 21596551 ~ 21597495 (-) |
