Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162293 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20296030 ~ 20296265 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2471963 | True | 236 | lncRNA | 0.39 | 1 | 20296030 | 20296265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509341 | LOC106566934 | coding | upstream | 114741 | 20173189 ~ 20181289 (+) |
| wbp1 | LOC106563291 | coding | upstream | 164649 | 20120015 ~ 20131381 (+) |
| LOC110509784 | LOC106563296 | coding | upstream | 253592 | 20025913 ~ 20042438 (+) |
| LOC110509783 | LOC106563299 | coding | upstream | 284641 | 19995364 ~ 20011389 (+) |
| LOC110509781 | LOC106563300 | coding | upstream | 318187 | 19969857 ~ 19977843 (+) |
| LOC110509791 | LOC106563287 | coding | downstream | 340299 | 20636564 ~ 20646034 (+) |
| LOC110509792 | LOC106563286 | coding | downstream | 396646 | 20692911 ~ 20712554 (+) |
| rab14l | LOC106563285 | coding | downstream | 497617 | 20793882 ~ 20811225 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | downstream | 687198 | 20983463 ~ 20985277 (+) |
| dnm1a | dnm1 | coding | downstream | 707984 | 21004249 ~ 21096175 (+) |
| G2162287 | NA | non-coding | upstream | 8501 | 20287203 ~ 20287529 (+) |
| G2162283 | NA | non-coding | upstream | 12789 | 20283015 ~ 20283241 (+) |
| G2162281 | NA | non-coding | upstream | 16443 | 20279359 ~ 20279587 (+) |
| G2162280 | NA | non-coding | upstream | 17092 | 20278731 ~ 20278938 (+) |
| G2162279 | NA | non-coding | upstream | 18277 | 20277538 ~ 20277753 (+) |
| G2162294 | NA | non-coding | downstream | 188 | 20296453 ~ 20296670 (+) |
| G2162296 | NA | non-coding | downstream | 2274 | 20298539 ~ 20299121 (+) |
| G2162417 | LOC106563345 | non-coding | downstream | 27407 | 20323672 ~ 20323897 (+) |
| G2162424 | LOC106563345 | non-coding | downstream | 50791 | 20347056 ~ 20347353 (+) |
| G2162450 | NA | non-coding | downstream | 80153 | 20376418 ~ 20376659 (+) |
| G2161678 | NA | other | upstream | 498256 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 543287 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 679519 | 19609602 ~ 19616511 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 1158462 | 19136428 ~ 19138160 (+) |
| LOC118945267 | NA | other | upstream | 1227246 | 19066137 ~ 19068784 (+) |
| LOC110509811 | LOC106563272 | other | downstream | 901653 | 21160126 ~ 21389662 (+) |
| G2163804 | LOC106613263 | other | downstream | 1304153 | 21600418 ~ 21601052 (+) |
| G2165628 | LOC106563266 | other | downstream | 2540806 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 2829515 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 3219357 | 23468400 ~ 23534217 (+) |
