Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162405 |
| gene name | LOC106563289 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20309189 ~ 20309802 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472094 | False | 614 | TUCP | 0.66 | 1 | 20309189 | 20309802 |
| TU2472087 | True | 558 | TUCP | 0.65 | 1 | 20309245 | 20309802 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lman2la | lman2l | coding | downstream | 165427 | 20138956 ~ 20143762 (-) |
| LOC110509788 | LOC106563294 | coding | downstream | 215494 | 20088225 ~ 20093695 (-) |
| LOC110509787 | LOC106563295 | coding | downstream | 245406 | 20050795 ~ 20063783 (-) |
| LOC110509785 | LOC106563298 | coding | downstream | 283281 | 20023128 ~ 20025908 (-) |
| LOC110509780 | LOC106563302 | coding | downstream | 358565 | 19946567 ~ 19950624 (-) |
| LOC110509794 | ddx54 | coding | upstream | 451859 | 20761661 ~ 20772043 (-) |
| LOC110509795 | LOC106563284 | coding | upstream | 501934 | 20811736 ~ 20869832 (-) |
| LOC110509797 | exos2 | coding | upstream | 561670 | 20871472 ~ 20878088 (-) |
| LOC110509798 | LOC106563283 | coding | upstream | 570612 | 20880412 ~ 20885181 (-) |
| LOC110509799 | fubp3 | coding | upstream | 582008 | 20891810 ~ 20921213 (-) |
| G2162401 | NA | non-coding | downstream | 5061 | 20303699 ~ 20304128 (-) |
| G2162390 | NA | non-coding | downstream | 23062 | 20285868 ~ 20286127 (-) |
| G2162386 | NA | non-coding | downstream | 32107 | 20276720 ~ 20277082 (-) |
| G2162376 | NA | non-coding | downstream | 45125 | 20263788 ~ 20264064 (-) |
| G2162375 | NA | non-coding | downstream | 45485 | 20263416 ~ 20263704 (-) |
| G2162418 | NA | non-coding | upstream | 15049 | 20324851 ~ 20325077 (-) |
| G2162423 | NA | non-coding | upstream | 24939 | 20334741 ~ 20335200 (-) |
| G2162429 | NA | non-coding | upstream | 49580 | 20359382 ~ 20359606 (-) |
| G2162461 | NA | non-coding | upstream | 75202 | 20385004 ~ 20385213 (-) |
| G2162469 | NA | non-coding | upstream | 81829 | 20391631 ~ 20391914 (-) |
| G2162127 | NA | other | downstream | 225571 | 20083145 ~ 20083618 (-) |
| G2162005 | NA | other | downstream | 324410 | 19984545 ~ 19984779 (-) |
| LOC110509757 | LOC106563370 | other | downstream | 1032183 | 19275539 ~ 19277044 (-) |
| G2158111 | akna | other | downstream | 3662592 | 16643681 ~ 16646597 (-) |
| G2162422 | LOC106563345 | other | upstream | 19946 | 20329748 ~ 20330138 (-) |
| surf4 | LOC106563281 | other | upstream | 660530 | 20970332 ~ 20978032 (-) |
| rabepk | rabepk | other | upstream | 835347 | 21138218 ~ 21146494 (-) |
| G2163913 | NA | other | upstream | 1286749 | 21596551 ~ 21597495 (-) |
| G2163923 | NA | other | upstream | 1302761 | 21612563 ~ 21612961 (-) |
