Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20464924 ~ 20465153 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472244 | True | 230 | lncRNA | 0.34 | 1 | 20464924 | 20465153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lman2la | lman2l | coding | downstream | 321162 | 20138956 ~ 20143762 (-) |
| LOC110509788 | LOC106563294 | coding | downstream | 371229 | 20088225 ~ 20093695 (-) |
| LOC110509787 | LOC106563295 | coding | downstream | 401141 | 20050795 ~ 20063783 (-) |
| LOC110509785 | LOC106563298 | coding | downstream | 439016 | 20023128 ~ 20025908 (-) |
| LOC110509780 | LOC106563302 | coding | downstream | 514300 | 19946567 ~ 19950624 (-) |
| LOC110509794 | ddx54 | coding | upstream | 296508 | 20761661 ~ 20772043 (-) |
| LOC110509795 | LOC106563284 | coding | upstream | 346583 | 20811736 ~ 20869832 (-) |
| LOC110509797 | exos2 | coding | upstream | 406319 | 20871472 ~ 20878088 (-) |
| LOC110509798 | LOC106563283 | coding | upstream | 415261 | 20880412 ~ 20885181 (-) |
| LOC110509799 | fubp3 | coding | upstream | 426657 | 20891810 ~ 20921213 (-) |
| G2162547 | NA | non-coding | downstream | 4864 | 20459824 ~ 20460060 (-) |
| G2162544 | NA | non-coding | downstream | 9337 | 20455280 ~ 20455587 (-) |
| G2162542 | NA | non-coding | downstream | 9839 | 20454651 ~ 20455085 (-) |
| G2162531 | NA | non-coding | downstream | 18013 | 20446705 ~ 20446911 (-) |
| G2162469 | NA | non-coding | downstream | 73010 | 20391631 ~ 20391914 (-) |
| G2162564 | NA | non-coding | upstream | 5598 | 20470751 ~ 20470995 (-) |
| G2162589 | NA | non-coding | upstream | 22133 | 20487286 ~ 20487558 (-) |
| G2162686 | NA | non-coding | upstream | 96028 | 20561181 ~ 20561412 (-) |
| G2162693 | NA | non-coding | upstream | 101457 | 20566610 ~ 20566822 (-) |
| G2162816 | NA | non-coding | upstream | 189497 | 20654650 ~ 20654865 (-) |
| G2162422 | LOC106563345 | other | downstream | 134786 | 20329748 ~ 20330138 (-) |
| G2162405 | LOC106563289 | other | downstream | 155122 | 20309189 ~ 20309802 (-) |
| G2162127 | NA | other | downstream | 381306 | 20083145 ~ 20083618 (-) |
| G2162005 | NA | other | downstream | 480145 | 19984545 ~ 19984779 (-) |
| surf4 | LOC106563281 | other | upstream | 505179 | 20970332 ~ 20978032 (-) |
| rabepk | rabepk | other | upstream | 679996 | 21138218 ~ 21146494 (-) |
| G2163913 | NA | other | upstream | 1131398 | 21596551 ~ 21597495 (-) |
| G2163923 | NA | other | upstream | 1147410 | 21612563 ~ 21612961 (-) |
| LOC110509827 | LOC106563259 | other | upstream | 3075989 | 23540883 ~ 23552798 (-) |
