Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162555 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20465292 ~ 20465502 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472245 | True | 211 | lncRNA | 0.39 | 1 | 20465292 | 20465502 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509342 | LOC106563289 | coding | upstream | 142256 | 20216712 ~ 20323036 (+) |
| LOC110509341 | LOC106566934 | coding | upstream | 284003 | 20173189 ~ 20181289 (+) |
| wbp1 | LOC106563291 | coding | upstream | 333911 | 20120015 ~ 20131381 (+) |
| LOC110509784 | LOC106563296 | coding | upstream | 422854 | 20025913 ~ 20042438 (+) |
| LOC110509783 | LOC106563299 | coding | upstream | 453903 | 19995364 ~ 20011389 (+) |
| LOC110509791 | LOC106563287 | coding | downstream | 171062 | 20636564 ~ 20646034 (+) |
| LOC110509792 | LOC106563286 | coding | downstream | 227409 | 20692911 ~ 20712554 (+) |
| rab14l | LOC106563285 | coding | downstream | 328380 | 20793882 ~ 20811225 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | downstream | 517961 | 20983463 ~ 20985277 (+) |
| dnm1a | dnm1 | coding | downstream | 538747 | 21004249 ~ 21096175 (+) |
| G2162506 | NA | non-coding | upstream | 42490 | 20422475 ~ 20422802 (+) |
| G2162504 | NA | non-coding | upstream | 43151 | 20421930 ~ 20422141 (+) |
| G2162498 | NA | non-coding | upstream | 48613 | 20416370 ~ 20416679 (+) |
| G2162470 | NA | non-coding | upstream | 72960 | 20392128 ~ 20392332 (+) |
| G2162462 | NA | non-coding | upstream | 79640 | 20385452 ~ 20385652 (+) |
| G2162566 | NA | non-coding | downstream | 7668 | 20473170 ~ 20475194 (+) |
| G2162577 | NA | non-coding | downstream | 13885 | 20479387 ~ 20479587 (+) |
| G2162588 | NA | non-coding | downstream | 21744 | 20487246 ~ 20487558 (+) |
| G2162590 | NA | non-coding | downstream | 25730 | 20491232 ~ 20491707 (+) |
| G2162607 | NA | non-coding | downstream | 48844 | 20514346 ~ 20514580 (+) |
| G2161678 | NA | other | upstream | 667518 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 712549 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 848781 | 19609602 ~ 19616511 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 1327724 | 19136428 ~ 19138160 (+) |
| LOC118945267 | NA | other | upstream | 1396508 | 19066137 ~ 19068784 (+) |
| LOC110509811 | LOC106563272 | other | downstream | 732416 | 21160126 ~ 21389662 (+) |
| G2163804 | LOC106613263 | other | downstream | 1134916 | 21600418 ~ 21601052 (+) |
| G2165628 | LOC106563266 | other | downstream | 2371569 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 2660278 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 3050120 | 23468400 ~ 23534217 (+) |
