G2162566


Basic Information

Item Value
gene id G2162566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 20473170 ~ 20475194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2472257
atatatcactagccactttaaacaatgctaccttatataatgttacttaccctacattattcatctcataagcgtacgtatatactgtactctatatcatcgactgcatccttatgtaatacatgtatcactagccacttttaactatgccactttgtttacatactcacctcatgtatatactgtactcgataccatctactgtatcctgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtataagacagtagttttggtattgttagttagattacttgttattactgtattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2472257 True 405 lncRNA 0.35 2 20473170 20475194

Neighbor

gene id symbol gene type direction distance location
LOC110509342 LOC106563289 coding upstream 150134 20216712 ~ 20323036 (+)
LOC110509341 LOC106566934 coding upstream 291881 20173189 ~ 20181289 (+)
wbp1 LOC106563291 coding upstream 341789 20120015 ~ 20131381 (+)
LOC110509784 LOC106563296 coding upstream 430732 20025913 ~ 20042438 (+)
LOC110509783 LOC106563299 coding upstream 461781 19995364 ~ 20011389 (+)
LOC110509791 LOC106563287 coding downstream 161370 20636564 ~ 20646034 (+)
LOC110509792 LOC106563286 coding downstream 217717 20692911 ~ 20712554 (+)
rab14l LOC106563285 coding downstream 318688 20793882 ~ 20811225 (+)
cyh9orf16 cssa11h9orf16 coding downstream 508269 20983463 ~ 20985277 (+)
dnm1a dnm1 coding downstream 529055 21004249 ~ 21096175 (+)
G2162555 NA non-coding upstream 7668 20465292 ~ 20465502 (+)
G2162506 NA non-coding upstream 50368 20422475 ~ 20422802 (+)
G2162504 NA non-coding upstream 51029 20421930 ~ 20422141 (+)
G2162498 NA non-coding upstream 56491 20416370 ~ 20416679 (+)
G2162470 NA non-coding upstream 80838 20392128 ~ 20392332 (+)
G2162577 NA non-coding downstream 4193 20479387 ~ 20479587 (+)
G2162588 NA non-coding downstream 12052 20487246 ~ 20487558 (+)
G2162590 NA non-coding downstream 16038 20491232 ~ 20491707 (+)
G2162607 NA non-coding downstream 39152 20514346 ~ 20514580 (+)
G2162675 NA non-coding downstream 78494 20553688 ~ 20553919 (+)
G2161678 NA other upstream 675396 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 720427 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 856659 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 1335602 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 1404386 19066137 ~ 19068784 (+)
LOC110509811 LOC106563272 other downstream 722724 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1125224 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 2361877 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 2650586 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 3040428 23468400 ~ 23534217 (+)

Expression


Co-expression Network