G2162701


Basic Information

Item Value
gene id G2162701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 20574263 ~ 20574622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2472394
gtcgtatattgcacaaatttggcctttatggaagagtggcaagaagaaagccatttcttaaagatagccataaaaagtgtcgtttaaagtttgccacaagccacctgggagatacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcacactgaacacaccatccctactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2472394 True 360 lncRNA 0.43 1 20574263 20574622

Neighbor

gene id symbol gene type direction distance location
LOC110509342 LOC106563289 coding upstream 251227 20216712 ~ 20323036 (+)
LOC110509341 LOC106566934 coding upstream 392974 20173189 ~ 20181289 (+)
wbp1 LOC106563291 coding upstream 442882 20120015 ~ 20131381 (+)
LOC110509784 LOC106563296 coding upstream 531825 20025913 ~ 20042438 (+)
LOC110509783 LOC106563299 coding upstream 562874 19995364 ~ 20011389 (+)
LOC110509791 LOC106563287 coding downstream 61942 20636564 ~ 20646034 (+)
LOC110509792 LOC106563286 coding downstream 118289 20692911 ~ 20712554 (+)
rab14l LOC106563285 coding downstream 219260 20793882 ~ 20811225 (+)
cyh9orf16 cssa11h9orf16 coding downstream 408841 20983463 ~ 20985277 (+)
dnm1a dnm1 coding downstream 429627 21004249 ~ 21096175 (+)
G2162681 NA non-coding upstream 15448 20558582 ~ 20558815 (+)
G2162676 NA non-coding upstream 19929 20554005 ~ 20554334 (+)
G2162675 NA non-coding upstream 20344 20553688 ~ 20553919 (+)
G2162607 NA non-coding upstream 59683 20514346 ~ 20514580 (+)
G2162590 NA non-coding upstream 82556 20491232 ~ 20491707 (+)
G2162702 NA non-coding downstream 14 20574636 ~ 20574870 (+)
G2162714 NA non-coding downstream 9598 20584220 ~ 20584424 (+)
G2162721 NA non-coding downstream 16345 20590967 ~ 20591214 (+)
G2162853 NA non-coding downstream 103870 20678492 ~ 20679138 (+)
G2162978 NA non-coding downstream 305792 20880414 ~ 20880989 (+)
G2161678 NA other upstream 776489 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 821520 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 957752 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 1436695 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 1505479 19066137 ~ 19068784 (+)
LOC110509811 LOC106563272 other downstream 623296 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1025796 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 2262449 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 2551158 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 2941000 23468400 ~ 23534217 (+)

Expression


Co-expression Network