Gene
RNA
| Item | Value |
|---|---|
| gene id | G2162904 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 20972262 ~ 20973279 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| surfeit locus protein 4 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472611 | True | 204 | lncRNA | 0.55 | 2 | 20972262 | 20973279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rab14l | LOC106563285 | coding | upstream | 161037 | 20793882 ~ 20811225 (+) |
| LOC110509792 | LOC106563286 | coding | upstream | 259708 | 20692911 ~ 20712554 (+) |
| LOC110509791 | LOC106563287 | coding | upstream | 326228 | 20636564 ~ 20646034 (+) |
| LOC110509342 | LOC106563289 | coding | upstream | 649226 | 20216712 ~ 20323036 (+) |
| LOC110509341 | LOC106566934 | coding | upstream | 790973 | 20173189 ~ 20181289 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | downstream | 10184 | 20983463 ~ 20985277 (+) |
| dnm1a | dnm1 | coding | downstream | 30970 | 21004249 ~ 21096175 (+) |
| LOC100135840 | grp78 | coding | downstream | 160130 | 21133409 ~ 21137594 (+) |
| LOC110509811 | LOC106563272 | coding | downstream | 186847 | 21160126 ~ 21389662 (+) |
| LOC110509813 | LOC106563271 | coding | downstream | 697249 | 21670528 ~ 21708957 (+) |
| G2162978 | NA | non-coding | upstream | 91273 | 20880414 ~ 20880989 (+) |
| G2162853 | NA | non-coding | upstream | 293124 | 20678492 ~ 20679138 (+) |
| G2162721 | NA | non-coding | upstream | 381048 | 20590967 ~ 20591214 (+) |
| G2162714 | NA | non-coding | upstream | 387838 | 20584220 ~ 20584424 (+) |
| G2162702 | NA | non-coding | upstream | 397392 | 20574636 ~ 20574870 (+) |
| G2163071 | NA | non-coding | downstream | 99318 | 21072597 ~ 21077941 (+) |
| G2163023 | NA | non-coding | downstream | 154191 | 21127470 ~ 21132783 (+) |
| G2163083 | rabepk | non-coding | downstream | 169605 | 21142884 ~ 21146376 (+) |
| G2163084 | NA | non-coding | downstream | 174134 | 21147413 ~ 21148049 (+) |
| G2163091 | NA | non-coding | downstream | 183916 | 21157195 ~ 21157414 (+) |
| G2161678 | NA | other | upstream | 1174488 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 1219519 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 1355751 | 19609602 ~ 19616511 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 1834694 | 19136428 ~ 19138160 (+) |
| LOC118945267 | NA | other | upstream | 1903478 | 19066137 ~ 19068784 (+) |
| G2163804 | LOC106613263 | other | downstream | 627139 | 21600418 ~ 21601052 (+) |
| G2165628 | LOC106563266 | other | downstream | 1863792 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 2152501 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 2542343 | 23468400 ~ 23534217 (+) |
