Gene
RNA
| Item | Value |
|---|---|
| gene id | G2163140 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 21243892 ~ 21244404 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472878 | True | 217 | lncRNA | 0.53 | 2 | 21243892 | 21244404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135840 | grp78 | coding | upstream | 106298 | 21133409 ~ 21137594 (+) |
| dnm1a | dnm1 | coding | upstream | 147717 | 21004249 ~ 21096175 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | upstream | 258615 | 20983463 ~ 20985277 (+) |
| rab14l | LOC106563285 | coding | upstream | 432667 | 20793882 ~ 20811225 (+) |
| LOC110509792 | LOC106563286 | coding | upstream | 531338 | 20692911 ~ 20712554 (+) |
| LOC110509813 | LOC106563271 | coding | downstream | 426124 | 21670528 ~ 21708957 (+) |
| pappaa | LOC106563270 | coding | downstream | 504876 | 21749280 ~ 21875071 (+) |
| LOC118945260 | NA | coding | downstream | 719269 | 21963673 ~ 21974980 (+) |
| trim32 | LOC106563269 | coding | downstream | 741361 | 21985765 ~ 21990241 (+) |
| LOC110509823 | LOC106563263 | coding | downstream | 2067232 | 23311636 ~ 23325364 (+) |
| G2163139 | NA | non-coding | upstream | 19 | 21243643 ~ 21243873 (+) |
| G2163107 | NA | non-coding | upstream | 61327 | 21182279 ~ 21182565 (+) |
| G2163104 | NA | non-coding | upstream | 67594 | 21175947 ~ 21176298 (+) |
| G2163093 | NA | non-coding | upstream | 84419 | 21159248 ~ 21159473 (+) |
| G2163091 | NA | non-coding | upstream | 86478 | 21157195 ~ 21157414 (+) |
| G2163150 | NA | non-coding | downstream | 11408 | 21255812 ~ 21256208 (+) |
| G2163151 | NA | non-coding | downstream | 13211 | 21257615 ~ 21257886 (+) |
| G2163153 | LOC107662719 | non-coding | downstream | 15103 | 21259507 ~ 21259721 (+) |
| G2163197 | NA | non-coding | downstream | 68951 | 21313355 ~ 21315119 (+) |
| G2163646 | NA | non-coding | downstream | 184025 | 21428429 ~ 21428632 (+) |
| LOC110509811 | LOC106563272 | other | upstream | 22711 | 21160126 ~ 21389662 (+) |
| G2161678 | NA | other | upstream | 1446118 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 1491149 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 1627381 | 19609602 ~ 19616511 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 2106324 | 19136428 ~ 19138160 (+) |
| G2163804 | LOC106613263 | other | downstream | 356014 | 21600418 ~ 21601052 (+) |
| G2165628 | LOC106563266 | other | downstream | 1592667 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 1881376 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 2271218 | 23468400 ~ 23534217 (+) |
| LOC110509837 | LOC106563250 | other | downstream | 2541215 | 23785060 ~ 23793640 (+) |
