Gene
RNA
| Item | Value |
|---|---|
| gene id | G2163153 |
| gene name | LOC107662719 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 21259507 ~ 21259721 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: insertion element IS630 uncharacterized 39 kDa protein-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2472891 | True | 215 | lncRNA | 0.51 | 1 | 21259507 | 21259721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135840 | grp78 | coding | upstream | 121913 | 21133409 ~ 21137594 (+) |
| dnm1a | dnm1 | coding | upstream | 163332 | 21004249 ~ 21096175 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | upstream | 274230 | 20983463 ~ 20985277 (+) |
| rab14l | LOC106563285 | coding | upstream | 448282 | 20793882 ~ 20811225 (+) |
| LOC110509792 | LOC106563286 | coding | upstream | 546953 | 20692911 ~ 20712554 (+) |
| LOC110509813 | LOC106563271 | coding | downstream | 410807 | 21670528 ~ 21708957 (+) |
| pappaa | LOC106563270 | coding | downstream | 489559 | 21749280 ~ 21875071 (+) |
| LOC118945260 | NA | coding | downstream | 703952 | 21963673 ~ 21974980 (+) |
| trim32 | LOC106563269 | coding | downstream | 726044 | 21985765 ~ 21990241 (+) |
| LOC110509823 | LOC106563263 | coding | downstream | 2051915 | 23311636 ~ 23325364 (+) |
| G2163151 | NA | non-coding | upstream | 1621 | 21257615 ~ 21257886 (+) |
| G2163150 | NA | non-coding | upstream | 3299 | 21255812 ~ 21256208 (+) |
| G2163140 | NA | non-coding | upstream | 15103 | 21243892 ~ 21244404 (+) |
| G2163139 | NA | non-coding | upstream | 15634 | 21243643 ~ 21243873 (+) |
| G2163107 | NA | non-coding | upstream | 76942 | 21182279 ~ 21182565 (+) |
| G2163197 | NA | non-coding | downstream | 53634 | 21313355 ~ 21315119 (+) |
| G2163646 | NA | non-coding | downstream | 168708 | 21428429 ~ 21428632 (+) |
| G2163650 | NA | non-coding | downstream | 169976 | 21429697 ~ 21430034 (+) |
| G2163657 | NA | non-coding | downstream | 178462 | 21438183 ~ 21438502 (+) |
| G2163664 | NA | non-coding | downstream | 185053 | 21444774 ~ 21445077 (+) |
| LOC110509811 | LOC106563272 | other | upstream | 38326 | 21160126 ~ 21389662 (+) |
| G2161678 | NA | other | upstream | 1461733 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 1506764 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 1642996 | 19609602 ~ 19616511 (+) |
| LOC110509753 | LOC106563373 | other | upstream | 2121939 | 19136428 ~ 19138160 (+) |
| G2163804 | LOC106613263 | other | downstream | 340697 | 21600418 ~ 21601052 (+) |
| G2165628 | LOC106563266 | other | downstream | 1577350 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 1866059 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 2255901 | 23468400 ~ 23534217 (+) |
| LOC110509837 | LOC106563250 | other | downstream | 2525898 | 23785060 ~ 23793640 (+) |
