G2163657


Basic Information

Item Value
gene id G2163657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 21438183 ~ 21438502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2473431
attttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctccc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2473431 True 320 lncRNA 0.45 1 21438183 21438502

Neighbor

gene id symbol gene type direction distance location
LOC110509811 LOC106563272 coding upstream 48521 21160126 ~ 21389662 (+)
LOC100135840 grp78 coding upstream 300589 21133409 ~ 21137594 (+)
dnm1a dnm1 coding upstream 342008 21004249 ~ 21096175 (+)
cyh9orf16 cssa11h9orf16 coding upstream 452906 20983463 ~ 20985277 (+)
rab14l LOC106563285 coding upstream 626958 20793882 ~ 20811225 (+)
LOC110509813 LOC106563271 coding downstream 232026 21670528 ~ 21708957 (+)
pappaa LOC106563270 coding downstream 310778 21749280 ~ 21875071 (+)
LOC118945260 NA coding downstream 525171 21963673 ~ 21974980 (+)
trim32 LOC106563269 coding downstream 547263 21985765 ~ 21990241 (+)
LOC110509823 LOC106563263 coding downstream 1873134 23311636 ~ 23325364 (+)
G2163650 NA non-coding upstream 8149 21429697 ~ 21430034 (+)
G2163646 NA non-coding upstream 9551 21428429 ~ 21428632 (+)
G2163197 NA non-coding upstream 123064 21313355 ~ 21315119 (+)
G2163153 LOC107662719 non-coding upstream 178462 21259507 ~ 21259721 (+)
G2163151 NA non-coding upstream 180297 21257615 ~ 21257886 (+)
G2163664 NA non-coding downstream 6272 21444774 ~ 21445077 (+)
G2163800 NA non-coding downstream 157593 21596095 ~ 21596411 (+)
G2163805 NA non-coding downstream 163212 21601714 ~ 21602265 (+)
G2163817 NA non-coding downstream 179329 21617831 ~ 21618098 (+)
G2163944 NA non-coding downstream 194049 21632551 ~ 21632780 (+)
G2161678 NA other upstream 1640409 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 1685440 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 1821672 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 2300615 19136428 ~ 19138160 (+)
G2163804 LOC106613263 other downstream 161916 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 1398569 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 1687278 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 2077120 23468400 ~ 23534217 (+)
LOC110509837 LOC106563250 other downstream 2347117 23785060 ~ 23793640 (+)

Expression


Co-expression Network