G2163805


Basic Information

Item Value
gene id G2163805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 21601714 ~ 21602265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2473580
atacaaaacaagaaccataaatagccttatctggtgcaaacaaacactgagacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccactccaggcagccatagactattctagacaaccccactaaccactatcccataacctacaacaaacccctagacaaaacacaccacataaaataacccatgtcacaccctggcctgaccaaaataataaagaaaacacaaaatactaagaccagggcgtgacacattcagatctaggatgtgttattttagtgttccctttatttttttgagcagtgtatatacagtatttcacaaaagtgagtacacccctcacatttttgtaaatatttgagtatatcttttcatgtgacaacactgaagaaatgacactttgctacaatgtaaagtagtgagtgtacagcttgcataacagtgtacatttgctgtctcctcaaaataactcaacacacaaccattaatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2473580 True 552 lncRNA 0.38 1 21601714 21602265

Neighbor

gene id symbol gene type direction distance location
LOC110509811 LOC106563272 coding upstream 212052 21160126 ~ 21389662 (+)
LOC100135840 grp78 coding upstream 464120 21133409 ~ 21137594 (+)
dnm1a dnm1 coding upstream 505539 21004249 ~ 21096175 (+)
cyh9orf16 cssa11h9orf16 coding upstream 616437 20983463 ~ 20985277 (+)
rab14l LOC106563285 coding upstream 790489 20793882 ~ 20811225 (+)
LOC110509813 LOC106563271 coding downstream 68263 21670528 ~ 21708957 (+)
pappaa LOC106563270 coding downstream 147015 21749280 ~ 21875071 (+)
LOC118945260 NA coding downstream 361408 21963673 ~ 21974980 (+)
trim32 LOC106563269 coding downstream 383500 21985765 ~ 21990241 (+)
LOC110509823 LOC106563263 coding downstream 1709371 23311636 ~ 23325364 (+)
G2163800 NA non-coding upstream 5303 21596095 ~ 21596411 (+)
G2163664 NA non-coding upstream 156637 21444774 ~ 21445077 (+)
G2163657 NA non-coding upstream 163212 21438183 ~ 21438502 (+)
G2163650 NA non-coding upstream 171680 21429697 ~ 21430034 (+)
G2163646 NA non-coding upstream 173082 21428429 ~ 21428632 (+)
G2163817 NA non-coding downstream 15566 21617831 ~ 21618098 (+)
G2163944 NA non-coding downstream 30286 21632551 ~ 21632780 (+)
G2163972 NA non-coding downstream 110938 21713203 ~ 21715005 (+)
G2164087 NA non-coding downstream 145455 21747720 ~ 21748171 (+)
G2164116 NA non-coding downstream 173336 21775601 ~ 21775818 (+)
G2163804 LOC106613263 other upstream 662 21600418 ~ 21601052 (+)
G2161678 NA other upstream 1803940 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 1848971 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 1985203 19609602 ~ 19616511 (+)
G2165628 LOC106563266 other downstream 1234806 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 1523515 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 1913357 23468400 ~ 23534217 (+)
LOC110509837 LOC106563250 other downstream 2183354 23785060 ~ 23793640 (+)
LOC110509859 LOC106563234 other downstream 2898143 24500361 ~ 24532163 (+)

Expression


Co-expression Network