G2163944


Basic Information

Item Value
gene id G2163944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 21632551 ~ 21632780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2473725
gtcataGGTCTCTAAGcacaacatagcttcagtgtgtaaatcagctagaaagatgtgtcggcatcgagttattgcctctggccccctcccagttagggggagtgataagctctacagcagagtctcacaactcaatcgctggttgaaaactgttttctgcccctcccaaaagatagaatttgtagataattggccctctttctgggactcatccATAACAGGACTGAGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2473725 True 230 lncRNA 0.47 1 21632551 21632780

Neighbor

gene id symbol gene type direction distance location
LOC110509811 LOC106563272 coding upstream 242889 21160126 ~ 21389662 (+)
LOC100135840 grp78 coding upstream 494957 21133409 ~ 21137594 (+)
dnm1a dnm1 coding upstream 536376 21004249 ~ 21096175 (+)
cyh9orf16 cssa11h9orf16 coding upstream 647274 20983463 ~ 20985277 (+)
rab14l LOC106563285 coding upstream 821326 20793882 ~ 20811225 (+)
LOC110509813 LOC106563271 coding downstream 37748 21670528 ~ 21708957 (+)
pappaa LOC106563270 coding downstream 116500 21749280 ~ 21875071 (+)
LOC118945260 NA coding downstream 330893 21963673 ~ 21974980 (+)
trim32 LOC106563269 coding downstream 352985 21985765 ~ 21990241 (+)
LOC110509823 LOC106563263 coding downstream 1678856 23311636 ~ 23325364 (+)
G2163817 NA non-coding upstream 14453 21617831 ~ 21618098 (+)
G2163805 NA non-coding upstream 30286 21601714 ~ 21602265 (+)
G2163800 NA non-coding upstream 36140 21596095 ~ 21596411 (+)
G2163664 NA non-coding upstream 187474 21444774 ~ 21445077 (+)
G2163657 NA non-coding upstream 194049 21438183 ~ 21438502 (+)
G2163972 NA non-coding downstream 80423 21713203 ~ 21715005 (+)
G2164087 NA non-coding downstream 114940 21747720 ~ 21748171 (+)
G2164116 NA non-coding downstream 142821 21775601 ~ 21775818 (+)
G2164126 NA non-coding downstream 156935 21789715 ~ 21790012 (+)
G2164131 NA non-coding downstream 163317 21796097 ~ 21796303 (+)
G2163804 LOC106613263 other upstream 31499 21600418 ~ 21601052 (+)
G2161678 NA other upstream 1834777 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 1879808 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 2016040 19609602 ~ 19616511 (+)
G2165628 LOC106563266 other downstream 1204291 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 1493000 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 1882842 23468400 ~ 23534217 (+)
LOC110509837 LOC106563250 other downstream 2152839 23785060 ~ 23793640 (+)
LOC110509859 LOC106563234 other downstream 2867628 24500361 ~ 24532163 (+)

Expression


Co-expression Network